| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0064 |
|---|
| Symbol | |
|---|
| ID | 5135005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 68174 |
|---|
| End bp | 68641 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640530387 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001214905 |
|---|
| Protein GI | 147671413 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3915] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00060183 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGGA TATTGCTGAT CTTGACCTTG TGGTGCAGCT CTTTCGCTTT GGCATCGAAC
ATCACGATAC AAATCGCAGA CGCGCCGCCT AAGGTATTTT CATTGCAAGA GCTAGCCACT
GAACTGCCTG CAGTTTCTTT TACCACTGGA CTGCCATGGA TTCATGGTTC ACATCGCTTT
ACGGGTTTTA AAGTGAGCGA TTTGCTTGAT TATCTACAGC AAGATCACGT CAAATCGGTG
ACTTTTATGG CATTGAATGA CTACGCTGCT AATATTTCGA TAGCGGATAT TCAATATTAT
GAACCGATTG TGGCGTACTA CATGGACGGT AATGAGATGA AAATTCGTCA CAAAGGCCCT
TTTTGGTTGG TGTATAACTT AGATCAAAAT CCAAAACTGA AGAACTCCGT TTATTACACC
CATATGGTTT GGCAGATAAG TCAAATTTTG ATTCATAAGA AGCCATGA
|
|---|
| Protein sequence | MRWILLILTL WCSSFALASN ITIQIADAPP KVFSLQELAT ELPAVSFTTG LPWIHGSHRF
TGFKVSDLLD YLQQDHVKSV TFMALNDYAA NISIADIQYY EPIVAYYMDG NEMKIRHKGP
FWLVYNLDQN PKLKNSVYYT HMVWQISQIL IHKKP
|
|---|
| |