Gene VC0395_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0033 
Symbol 
ID5134286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp36274 
End bp37194 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content46% 
IMG OID640530356 
Producthypothetical protein 
Protein accessionYP_001214874 
Protein GI147672189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.737602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGT TGAGTGCTCA GCAAGCCTAC GAAAATGGTC GTTTGCTACG TGCGCAATTT 
AAGAACTTAG CGGCTCGCGA ATATTTGAAA TACGCGGCAG ACCTTGGTGA GCCTAATGCG
GCTTATCTTT ACGCGATGGA AGTGGCCAAC TACCGAACTA CCATTCGAAC CCCGCCTGAA
AGCCAGCACT ATTTATTGCT CGCCGCTCAA GGTGGAAGCC GTCAAGCGAT GCGAGTGTTG
TATCAAAACG GTGAGTGGCT CAGAGCTGCA GAACGCAGTT TATGGCAACA AACTTATTAC
GATACTTTGA TTGAATTAGG CTCTCGTGAA CCGAGTCAGG CCGCTTATGA GCTCGCGCTG
TTCCATCAAA AGGATAACCC CAAGCTTGCC CAGCATTATT TAACGATTGC AGTTGAATTT
GAACACCCCG CAGCTCTGAT GCTTATGGCG CAACAGATTG AGCAAGGAGA GGGCAGTTAT
CCCATGCCTG GTAGCCGAGC AACCGAAGCT CGAAAAACGT ATCTGAAAGC GGCGCAAACG
GGCTATATCC CTGCGATAAG AAACTATATT CAACTTCTTG AAAATAAAGG TAAATACCAA
GATGCCTATT ATTGGCGCCA GCAGGCAGTA CAGCGTGGCG ATCTCACTTC TTTGGTGGCG
ATGGGCGGTA TTCTCAGTGG ACAGAGTGAG TTTTATCGTT TTGTCGAGCC TGATCTTAAG
CAGGCCAAGG CTTACTTCAA TCGATATTTA GAAGTGGCAG GCAGCGATCG CTTGAGTCAT
GTCTACCAAA ATAGCCAAAA GCAACTGCTC GATATTTCAA TGCAATTAAA TGGGCATGAG
AAAGAAATTG CAGAGAAAAT AGAGCTTCAA CTCGAAAATT ATCAGCCTTT TTTCAACCAT
GATGCTTACT GGGATAATTA G
 
Protein sequence
MQQLSAQQAY ENGRLLRAQF KNLAAREYLK YAADLGEPNA AYLYAMEVAN YRTTIRTPPE 
SQHYLLLAAQ GGSRQAMRVL YQNGEWLRAA ERSLWQQTYY DTLIELGSRE PSQAAYELAL
FHQKDNPKLA QHYLTIAVEF EHPAALMLMA QQIEQGEGSY PMPGSRATEA RKTYLKAAQT
GYIPAIRNYI QLLENKGKYQ DAYYWRQQAV QRGDLTSLVA MGGILSGQSE FYRFVEPDLK
QAKAYFNRYL EVAGSDRLSH VYQNSQKQLL DISMQLNGHE KEIAEKIELQ LENYQPFFNH
DAYWDN