| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0009 |
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| Symbol | rbsC |
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| ID | 5134762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 8068 |
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| End bp | 9036 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530332 |
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| Product | ribose ABC transporter permease protein |
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| Protein accession | YP_001214850 |
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| Protein GI | 147672299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATA CGACATCTGA TAACCGTAAA AAACTGCTCA GCAAAGAGTG GTTGATTGAA
CAAAAATCGC TGATCGCACT GCTGTTTTTA GTGGTTGTCG TCTCTTTCTT AAACCCGAAT
TTTTTCACGG TTGATAACTT ACTGAATATT CTGCGCCAAA CTTCGGTCAA CGCGATCATC
GCGGTGGGTA TGACCTTGGT CATCTTAACC GCAGGGATTG ATTTGAGCGT TGGCTCAGTA
TTAGCACTGT GTGGCGCTTT TGCGGCCACC TTAGTGGCGA TGGAAGTTCC TGTTCTGGTA
GCTGTGCCTA CGGCTTTGCT GGCTGGTGCT GCGCTTGGCG CAATCAGCGG CATCATCATT
GCCAAAGGCA AAGTGCAGGC CTTTATCGCG ACGTTAGTGA CGATGACTCT GCTGCGCGGT
GTCACTATGG TGTACACCGA TGGGCGTCCG ATTTCGACCG GATTCACTGA TACGGCGGAC
ACCTTTGCAT GGTTTGGTAC AGGCTACACA TTGGGCATTC CGGTTCCGGT ATGGCTGATG
GTCGTGGTAT TTGCCGGCGC TTGGTACTTG CTCAATCACA CTCGCTTTGG CCGCTATGTG
TATGCAGTGG GCGGCAACGA ATCAGCAACT CGCCTTTCAG GTATCAACGT AGATCGCGTC
AAAATCGGCG TGTATGCCAT CTGTGGTTTA CTGGCTGCGC TAGCAGGCAT CATCGTCACA
TCTCGCCTTT CTTCTGCGCA ACCTACTGCG GGTATGGGCT ATGAGTTGGA TGCGATTGCG
GCTGTGGTGC TAGGGGGCAC CAGTTTGATG GGCGGTAAAG GTCGCATCAT GGGCACGCTG
ATCGGCGCTC TCATCATCGG ATTTTTAAAC AACGCATTGA ACTTGCTCGA TGTTTCCTCC
TACTACCAAA TGATTGCGAA AGCTGTGGTT ATTTTGCTGG CGGTCTTGGT AGACAACAAA
AATAAATAA
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| Protein sequence | MTNTTSDNRK KLLSKEWLIE QKSLIALLFL VVVVSFLNPN FFTVDNLLNI LRQTSVNAII
AVGMTLVILT AGIDLSVGSV LALCGAFAAT LVAMEVPVLV AVPTALLAGA ALGAISGIII
AKGKVQAFIA TLVTMTLLRG VTMVYTDGRP ISTGFTDTAD TFAWFGTGYT LGIPVPVWLM
VVVFAGAWYL LNHTRFGRYV YAVGGNESAT RLSGINVDRV KIGVYAICGL LAALAGIIVT
SRLSSAQPTA GMGYELDAIA AVVLGGTSLM GGKGRIMGTL IGALIIGFLN NALNLLDVSS
YYQMIAKAVV ILLAVLVDNK NK
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