| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0005 |
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| Symbol | pnuC |
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| ID | 5134019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 4195 |
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| End bp | 4929 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530328 |
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| Product | pnuC protein |
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| Protein accession | YP_001214846 |
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| Protein GI | 147671650 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3201] Nicotinamide mononucleotide transporter |
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| TIGRFAM ID | [TIGR01528] nicotinamide mononucleotide transporter PnuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00212076 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCTGA TGACTTTTTT TGATATTAAC CACACCCTAG TCAATATTCC GATCGGTGGC
GGATATGCCA TGTCGTGGAT TGAAGCGGTA GGAACGCTGT TTGGTTTGCT GTGTATCTGG
TTTGCGAGCC AAGAAAAAAC CATTAACTAT TTGTTTGGCT TGATTAATGT CACGCTGTTT
GCGGTGATTT TCTATCAGAT CCAACTGTAT GGCATCTTGT TGCTCCAGCT GTTTTTCTTC
TGCGCCAACA TTTATGGCTG GTATGCGTGG ACTCGTCCCA ATGCCCAAGG GGATACGCTC
GTCGTGCGTT GGATGAGCAG CCAAAAATTG CTGCTCACGG CATGCATTAG CGTGATCAGC
ATTATCTTGA TGACCATTTA TATCGATCCG GTATTCTTTT CTTTAGCCAA TATTACCGTT
GATGTATTGA ATCTGTTCGG CGCACAGTTG GATCGCCCAG TGTTATCTCC GGATGCTTTC
CCATTCTGGG ATGCGACGAT GACAGTACTT TCTGTGGTGG CGCAGATTTT GATGACGCGT
AAATACGTGG AAAACTGGAT TCTGTGGGTG GTGATCAACA TCATCAGTGT CGGAATTTAT
GCGGCGCAAG GTGTGTATGC CCTCTCTATC GAATACGCGA TTTTGCTGTT CATCGCTGCC
AATGGCACTC GAGCTTGGAT GCAAACCGCT CGCCATAATG CAGAAAAAAA CCTGACCATT
GAGGCAACTG CATGA
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| Protein sequence | MDLMTFFDIN HTLVNIPIGG GYAMSWIEAV GTLFGLLCIW FASQEKTINY LFGLINVTLF
AVIFYQIQLY GILLLQLFFF CANIYGWYAW TRPNAQGDTL VVRWMSSQKL LLTACISVIS
IILMTIYIDP VFFSLANITV DVLNLFGAQL DRPVLSPDAF PFWDATMTVL SVVAQILMTR
KYVENWILWV VINIISVGIY AAQGVYALSI EYAILLFIAA NGTRAWMQTA RHNAEKNLTI
EATA
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