Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0002 |
Symbol | glpQ |
ID | 5134424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 1527 |
End bp | 2594 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530325 |
Product | glycerophosphodiester phosphodiesterase |
Protein accession | YP_001214843 |
Protein GI | 147672362 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000133502 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAC CATTCTCGCT TTCTCTGCTG GCTCTGGCCT GCTCAACGTC TTTATTTTCA AGCATTGTTT CTGCAGAACC AATAGTGATT GCTCACCGTG GAGCCTCTGG CTACTTGCCA GAACATACAT TAGAAGCCAA AACACTGGCT TATGCGATGA AACCGGATTA CATCGAGCAA GATGTGGTGA TGACCAAAGA CGATCAATTG GTGGTATTAC ATGATCACTA TTTGGATCGC GTCACCGATG TTGCGGAGCG TTTCCCTAAC CGCGCACGAG CCGATGGCCG TTATTACGCG ATTGACTTTA CCTTAGCCGA AATCAAAACC CTGCGTGTCA CGGAAGGGTT TGATATTGAT GCGCAAGGCA ATAAAGTCGC CGGTTTTCCT GATCGTTTCC CTCTTTGGAA AGGGGATTTC ACTGTCCCGA CTCTCGCAGA AGAAATTGAG CTGATTCAAG GGCTCAATAA AACGCTCGGT TACAACATTG GTATCTACCC TGAAATCAAA GCACCTTGGT TTCACCGCCA CGAAGGCAAA GATATTTCTC AAGCCGTCCT CAAAGTGCTA AAGCAGTATG GTTACGACAG CAAAGACGAC AAAATCTATC TGCAATGTTT TGACCCTATC GAGCTAAAAC GCATTAATGA TGAGCTGCTT CCTGCAATGA AGATGGATCT CAATCTAGTT CAGCTGCTGG CGTACACCGA CTGGAACGAA ACCATGGTTT ATCAAGCAGA CCAAGCCACA CCTTATGACT ATGACTGGAT GTTTGCCGAA GGCGGCATGG CCAAAGTCGC GCAATACGCC GATGGCATCG GCCCTTGGAA ACCTATGTTG GTTGATGATG CTTCCACCAA AGACAACATC ATGATTAAGC CGTTGATGAA GCAAGCAAAA GAGGCTGGCC TCGTGGTGCA TCCTTACACT TTCCGAGCCG ATAAAGGGCG CATTGCACCT TGGGCAGACA ACTTCGAAGG GATGTTGGAT GTGTTCTACA ACCAAGTGAA AGTCGATGGT CTGTTCACTG ACTTCCCCGA TAAAGCGGTG GCTTTCTTAA ATCAATAA
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Protein sequence | MLKPFSLSLL ALACSTSLFS SIVSAEPIVI AHRGASGYLP EHTLEAKTLA YAMKPDYIEQ DVVMTKDDQL VVLHDHYLDR VTDVAERFPN RARADGRYYA IDFTLAEIKT LRVTEGFDID AQGNKVAGFP DRFPLWKGDF TVPTLAEEIE LIQGLNKTLG YNIGIYPEIK APWFHRHEGK DISQAVLKVL KQYGYDSKDD KIYLQCFDPI ELKRINDELL PAMKMDLNLV QLLAYTDWNE TMVYQADQAT PYDYDWMFAE GGMAKVAQYA DGIGPWKPML VDDASTKDNI MIKPLMKQAK EAGLVVHPYT FRADKGRIAP WADNFEGMLD VFYNQVKVDG LFTDFPDKAV AFLNQ
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