Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | UUR10_0037 |
Symbol | |
ID | 6984223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
Kingdom | Bacteria |
Replicon accession | NC_011374 |
Strand | - |
Start bp | 39245 |
End bp | 42313 |
Gene Length | 3069 bp |
Protein Length | 1022 aa |
Translation table | 4 |
GC content | 25% |
IMG OID | 643399614 |
Product | type I site-specific deoxyribonuclease, HsdR family |
Protein accession | YP_002284450 |
Protein GI | 209554614 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.18362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATT CAAATATTTC TTATGATGAA AAATATTTAG AAGAACAAGT TATTGAAAAA ATTAAAGCAT TAGATTATGA ATATATTGAT CCAAGGAGTT TTTTAGAAAA ACGTGATTCA AAACAAGAAA TTATTGATTG AACAAAATTA GATGAAGCAA TTAGACGAAT TAATAAGAGA ATTGAAGATT ATGAAGTCAA CGATATCATT AATAAAATTC AAAACGAATT AAATAATGCT AACTTATTAG ATCGTAATAA AAAGCTACTT AGTTTTATGG TTCATGGTAT TTCAATTTGA AACCAAAAAG AAGAAATTAA TAAAACAAGA AAAATTATTG ATTTAGATAG AATCAATAAT AATGATTTTG TTGTTACTAA TCAATTAATT GTACGTTCAA CTCATCCTGA ATGAGAAAAT CAAATTCCTG ATGTTGTTAT TTATATTAAT GGAGTACCTG TTGTTATTAT TGAATTAAAA ACAATGAAAT CATCAAATGA TATCTTATTA GAAGCTGGCG CTCAAATCCA ACGTTATGTT GATTTTATTC AAGATATTTT TTCTTTTAAT TTATTTTCAA TTATTTCTAA CGGGGCAATT TCAAAAATTG GTACTTTTCC TAAAAAAGAT GATGATTTTG AAATTTGAAG AAATGAACAG TTTTCTTCAG ATATTTTTGA TACGATTAAA TTTTTATTAG CACCAAAAAA CTTATTTGAT CTATTGCGTA ATTTTATCTT TTTTACTAAC AAAGGTAATA AAATATTTCC TAAATATTAC CAATATTTTG GCATTAAAAA AGGGATTAGT AGTATTCAAA AAGCATGAGA TGAAAACCAA CAAAAAGCAG GAATTATTTG ACATACTCAA GGTTCTGGTA AATCATTATC AATGGTAATG TTGGTTAGTA ATTTAAAAAA ATGTTTAGAT TTAAAACGTT TAACAGCTTT AGTTATTACT GATCGTAAAG ATTTAGATGG ACAACTTTTT AATACATTTA GTATCTGTGA AGATTATTTA CACCAAACTC CTTATCAAAT ATCTAGTTGT GAGGATTTAA AAAAATCATT ACAAGATGTT AAACAAGATG GTGTTTATTT TTCAACAATT CAAAAATTTA ATGATGAAAT TGAATTAAGT GATCGTAAAG ATATTTTAAT CATTAGTGAT GAAGCCCATC GTTCACATAA TAATTACTTA GCAATTGATG AAAACAATGA AGAAAATAAT AGTAATAAAC CATATTCTTA TTTATTAAGA AAAGCTTTTC CTAATGCGAT ATTTATTGGA TTTACTGGAA CACCAATTGA AAATAAAGAT GTTAGTACAT CAGAAATTTT TGGTGATGTA ATTCATAAAT ATACATTATC ACAAGCTACA GAGGATAAAT CAATTGTTCC TATCAATTAT GAAAATGCTC AAGTTGAATT TAAATTAGAT GAAGAAAAAC TAAAATTAAT TGATGAGCAA AACGAAAAAG AAAATCAAGA AATTAAAAAT AATCATAAAA AAGATGCTAA TGATATTATT GTCAAAAAAG ATATTAAAAA AATTGAAGAA ATCTTACAAA TTCTTCAATC TGATGAACGA ATTAAAATCA TTGTTAAACA TTTCATTAAA CACTATGAAG CACGAAGAGG CGTTTTAAAA GATAAAGCAA TGTTTGTAGC CATGAATAGA TTATGTGCTG AAAAGTATTA TCATGAAATA TTAAGAAATA GACCTGATTG AGTTAATAAA ATCAAGTTAA TTATTACACC TAATAAAAAA GACTCACCAG AATTAACAAA AATTATTGGA TCAGAACAAG ATCGTAAGAA TGTGATTAAT CAATTTAAAG ATCCAAATTC TGAAATTAAA ATTCTAATTG TTGTTGATAT GTTATTAACA GGTTATGATG TACCATCGCT TGATGTAATT TATTTTGATC GTGTTTTAAA GATGCATAAT TTAATGCAAG CTATGGCACG TGTTAATCGA AAATATATTG ATAAAGATAA TCCTAACATT AAAAAAGAAG CGGGACTTGT AGTTGACTAT ATTGGAATTT TTAAAAGAAT TCAAGAAGCA TTAAAATTTT ATTGAGATGG CAATCAAACA AAAAATAAAT TTAAATTTGA AGAAAAATAT CAAAATGTTG ATGATATCTT AGCAAATTAT AATGATGCTT TAAAAAATGT TTATGATAAA TATTTTAGTG ATTTAAATGT GGCAAAATTA ATCGATGAAA AAAATTATTT AGCTTTAGTA GACGAAGTTT TCAACAAGTC ATTAACTTCC GAATTTATTC ATGATGTTAA AAACATTAGA GTTGCTTATA AAATGGTTAT TTCAACACTT AGTGAAGAAA TTATTGAACG TTCAAATTTA TTATTTGCAA CGGCTGCATA TATTAAAAAC ACGAATGATG GTAATGTTGA TTATGATGAA TACAACAAGG CTTTACGTGA ATCACTAAAA GATTCAGTTG CTTTCTTTGA TATTAAAGAA CCCGAACACA AACAAATTCA TAAACTAGTT GATATTGAAA GCTTTGTTTC AAATATCAAA AAGAATGAAG ATATGGGAAA TCAACAAAAG AAACAAATGT TATTTAATCG TTTTTTAAAT AAAATTAAAA ATAGTGTAAA TATTTCAATT ATTGCTAAAA CAAAACTATC ACAAAAACTT GAAATGGTTT TCGAACGCTT TAAAATGGAT AGTTTATCAT ATGAAGAATT TATTCAATAT ATTTTTAACG AATTTGGTGA TGATTTAATC AATGATGAGA TTGAAAATAA TGAAGAAAAA TTCTATGTAA AAATGTTTGT TGATGCAGTT CGTTTAAACG AGGATCAATC GGATGAAGAA ATTGAATCTA TTGCTTATGA GATTTATGAT GCAATCACAA TGCAAGGAAA GCGTTTAATT GAAAAAAGTT GATTACATAG TGAGGCTAAT CGTAAGGATG TACGTCGTAT TATAAAAGAA GTATTGATAT TTAAAAATTA TCCACCTGAA AATCGTGAAA AAACATCATA TGATATAGTT GAACAAATTG AAGAAATATT AGATAATAGA GGAAATTAA
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Protein sequence | MSDSNISYDE KYLEEQVIEK IKALDYEYID PRSFLEKRDS KQEIIDWTKL DEAIRRINKR IEDYEVNDII NKIQNELNNA NLLDRNKKLL SFMVHGISIW NQKEEINKTR KIIDLDRINN NDFVVTNQLI VRSTHPEWEN QIPDVVIYIN GVPVVIIELK TMKSSNDILL EAGAQIQRYV DFIQDIFSFN LFSIISNGAI SKIGTFPKKD DDFEIWRNEQ FSSDIFDTIK FLLAPKNLFD LLRNFIFFTN KGNKIFPKYY QYFGIKKGIS SIQKAWDENQ QKAGIIWHTQ GSGKSLSMVM LVSNLKKCLD LKRLTALVIT DRKDLDGQLF NTFSICEDYL HQTPYQISSC EDLKKSLQDV KQDGVYFSTI QKFNDEIELS DRKDILIISD EAHRSHNNYL AIDENNEENN SNKPYSYLLR KAFPNAIFIG FTGTPIENKD VSTSEIFGDV IHKYTLSQAT EDKSIVPINY ENAQVEFKLD EEKLKLIDEQ NEKENQEIKN NHKKDANDII VKKDIKKIEE ILQILQSDER IKIIVKHFIK HYEARRGVLK DKAMFVAMNR LCAEKYYHEI LRNRPDWVNK IKLIITPNKK DSPELTKIIG SEQDRKNVIN QFKDPNSEIK ILIVVDMLLT GYDVPSLDVI YFDRVLKMHN LMQAMARVNR KYIDKDNPNI KKEAGLVVDY IGIFKRIQEA LKFYWDGNQT KNKFKFEEKY QNVDDILANY NDALKNVYDK YFSDLNVAKL IDEKNYLALV DEVFNKSLTS EFIHDVKNIR VAYKMVISTL SEEIIERSNL LFATAAYIKN TNDGNVDYDE YNKALRESLK DSVAFFDIKE PEHKQIHKLV DIESFVSNIK KNEDMGNQQK KQMLFNRFLN KIKNSVNISI IAKTKLSQKL EMVFERFKMD SLSYEEFIQY IFNEFGDDLI NDEIENNEEK FYVKMFVDAV RLNEDQSDEE IESIAYEIYD AITMQGKRLI EKSWLHSEAN RKDVRRIIKE VLIFKNYPPE NREKTSYDIV EQIEEILDNR GN
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