| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | UUR10_0003 |
|---|
| Symbol | prfA |
|---|
| ID | 6984122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011374 |
|---|
| Strand | + |
|---|
| Start bp | 1957 |
|---|
| End bp | 3036 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643399580 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_002284416 |
|---|
| Protein GI | 209554361 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATA ATAAAAAACT TTATGAAGCC ATTGAAAGAG TTGCTGTTAA AAACAAAACC
TTAAAACAAG AATTAGAAAC AATTACATCA GATTTCAAAA AAATTAAAGA AATTAATATT
CAATTAAAGA AGACTACCAA AATTGCTGAA GCATTTGCAA AATATAAACA AAAAATCGAT
GCTGGTATAG TTGCTGAAGA ATTATTAAAT ACTGAAAAAG ATTTAGAATT AGTTGAATTA
GCTCAAATGG ATTTAGATGA TGCTAAAGCA AGTATTCCAG TAATTGAAAA TGAACTAAAA
ATCATGTTAT TACCAACTGA TCCTAACGAT GATAAAAACG TTATTGTTGA AATGCGTCCT
GCAGCTGGTG GGGATGAATC TTCAATTTTT GTAGGTAATT TATTTGATAC ATATCGTGCA
TATACTGAAA GTAATAATTG AAAAATGAAA ATTATTGAAA TGACACCAAA CGCTGTTGGT
TTTAGTTTCA TTTCTTTTAT GATTTCAGGT GAGGAAGTTT ATTCACGAAT GAAATTTGAA
TCAGGAGTAC ACCGTGTACA ACGAGTTCCA GCAACTGAAT CTAAAGGGCG TGTGCATACA
TCAACTATTA CTGTTGCTGT ACTTCCTGAA CAAGATGAAG TTGATGTTGT AATTAATCCA
TCAGATTTAA GAATTGATAC TTATCGTGCG AGTGGGGCTG GTGGACAACA TGTTAATAGA
ACTGAATCAG CTGTAAGAAT TACACATATT CCAACTGGAG TTGTCGCTGC CTGTCAAGAA
GGTAAATCAC AAATCGAAAA TCGTGAAACA GCAATGAAAA TGTTACGAGC CAAACTATGA
GAAGCAGCTC AAGAACAACA AAACGCTGAA TTTGCTAATT TACGAAAAAA TCAAGTTGGT
ACAGGTGATC GTTCTGAAAA GATTCGTACT TATAACTATC CCCAAAACCG TGTTACTGAC
CATCGAATTA GTCTAACATT AAATAAATTA GATCAAATTA TGATGGGTGA ATTGGATGAA
ATCATCGACG CATTAATTAC TGATGAACAA ACAAATTTAA TGGCTAATTT AGGTATTTAA
|
|---|
| Protein sequence | MEYNKKLYEA IERVAVKNKT LKQELETITS DFKKIKEINI QLKKTTKIAE AFAKYKQKID
AGIVAEELLN TEKDLELVEL AQMDLDDAKA SIPVIENELK IMLLPTDPND DKNVIVEMRP
AAGGDESSIF VGNLFDTYRA YTESNNWKMK IIEMTPNAVG FSFISFMISG EEVYSRMKFE
SGVHRVQRVP ATESKGRVHT STITVAVLPE QDEVDVVINP SDLRIDTYRA SGAGGQHVNR
TESAVRITHI PTGVVAACQE GKSQIENRET AMKMLRAKLW EAAQEQQNAE FANLRKNQVG
TGDRSEKIRT YNYPQNRVTD HRISLTLNKL DQIMMGELDE IIDALITDEQ TNLMANLGI
|
|---|
| |