Gene Tter_2439 details

Gene Information

• Locus tag: Tter_2439
• ID: 8640468
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013526
• Strand: +
• Start bp: 590566
• End bp: 592665
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 65%
• Product: glycoside hydrolase clan GH-D
• Protein accession: YP_003324155
• Protein GI: 269839463

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000265114
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTATCG TTGAGAGAGA TGGTACCTGG TGGATAGCGG GGCAGAGGTT CTGCTACGCG 
CTGCGGCGCG ACGAGGAGGG CCAGCTGCGT CACCTACACT TCGGCTCCCT TTTGACGGAT 
GCGGATGTAT TGGGGCGGGC TGCCAAATTC ACTGGCCCAT TCATGGGAAA CTTGGGACTG 
GAGTACCCGG CATGGGGAGG TTTGTACTTT GAGGAGCCGT GCCTGAAGCT CTCGTTTGCA 
GACGGCAGCA GGGGAGCCTT GCTGGAGTAC TCCTCGCACA GGATCTGGGA GGAGGAGGGT 
GTCAGCTGGC TGGAGATCAC CTTGCGGGAT CCAGCTTACC CACTGCTGGT GAGGCTGGCT 
TATGGGCTGC ACGAGGGCTA TGACCTCCTC GAGAGGTACG CTGAGGTGGT CAACGAGTCG 
GGGGAGCCGG TGCAGCTGGA GGAGGTGCTC TCCGCCGCTT GGCACCTGCC CCCGGGAGGG 
GGCTATACCC TGGTGCACCT CGCCGGCCGC TGGGGCGCGG AGACCCAGGT CATAGAGGAG 
CCCGTGACCC CGGGCAAGAA GGTGCTCGAG AGCCGCAGGG GACACACCAG CCACTTCGCC 
AACCCGTGGT ACGCGATCAC CCGGGGAAAA CCCCTCGAGG AGAGCTGCGA GGTTTGGTTC 
GGGGCCGTGG CCTGGAGCGG CAACTGGAAG CTGGCGGTCG AGGCCGACAC CACTGGCAGG 
GTTCAGGTCT CCGGCGGCAT CAACGACTTT GACTTCGCTT GGCGGTTGGG GCCAGGCGAG 
AGCTTCCGAA CCCCCTCATT CTTCGGCGGC TTCACCTCCG GGGGGCTGGG GGATGCGAGC 
CGCGTCCTGC ACAGGTTCGA GCGGGAGAGG GTGCTGCCCA GGGAGTTCGC CTCCCAGCCA 
CGGCCGGTGC TGTACAACTC TTGGGAGGCC ACGGGCTTCG ACATCAACGA GGAGAACCAG 
TCCCGCTTGG CGGAGATAGC CGCCTCGCTG GGGGTCGAGC TGTTCGTGGT GGATGACGGC 
TGGTTCGGCG CCCGCGACAG CGACCGCGCT GGGTTGGGCG ACTGGACCCC CAGCCCCAAG 
AAGTTCCCCC AGGGGTTGGG TCCCCTCATA CAGAGAGTGA AGGACCTTGG GATGGCGTTC 
GGGCTGTGGG TGGAGCCTGA GATGGTCAAT CCGGACAGCG ACCTGTACCG AGCCCATCCT 
GACTGGGTGT ATCACTTCCC GAAGAGGCCA CGCACGGAGA GCCGCAACCA GCTGGTGCTC 
AACCTGGCTC GGCCGGAAGT CGAGGAACAT ATCACCAGCG TGCTGGACAA GCTCCTGTCG 
GAGTACGACA TCGACTTCAT CAAGTGGGAC ATGAACCGCC CGTTCTCGGA GCCTGGTTGG 
CCCGATGCGC CGCCGGAGCG GCAGCGGGAG GTGTGGGTGC GGCATGTGCA GGCCGTCTAC 
CGGATCCTGC GCACCCTGCG GGAGCGGCAC CCACGCGTCG CGTTTGAGTC CTGCTCAGGG 
GGCGGAGGCA GGGTGGACCT GGGGATCATG GCGCTTACCG ACCAGGTATG GACGAGCGAC 
AACACCGACG CCTACGACCG CCTGTGGATC CAGGAGGGCT ACTCCATGGC CTACTGCGCC 
CGGACGATGA TGTGCTGGGT GACGGACTCT CCCTCCCACT TCTCCAACCG CGCCGTGCCG 
CTGCGCTTTC GCTTCCACTG CGCGATGATG GGGGGGCTGG GCATCGGTGG CAACCTGCTG 
AAGTGGTCTG AGCCGGAGCT GGAGGAGGCT CGTAGGCTGG TAGCCAGGTA CAAGGAGATC 
AGGCACATCG TGCAGTTCGG TGACCAGTAC AGGCTGTCCT CCCCTCGCAA GGGGGACGTG 
ACTGCCGTGC AGTACGTGTC CCCAGAGCGT GGGGAGTCGG TGTGCTTCGT GCTGAGGCCC 
GTGCACAGAT TGATGGATCC CATGCCGAGG GTGCGGCTGC TAGGACTTGA CCCCGATGCC 
ACGTACCAGG TCGAGCCTCT GGGAGTCAAG CTCAGGGGTG ACGTACTGAT GGCCCACGGC 
CTCGAGCTGC CGCTTTGGGG AGACTGGGCG AGCGAGCTGC TCTGGCTCAG GAGGGGCTGA 

 

Protein sequence

MPIVERDGTW WIAGQRFCYA LRRDEEGQLR HLHFGSLLTD ADVLGRAAKF TGPFMGNLGL 
EYPAWGGLYF EEPCLKLSFA DGSRGALLEY SSHRIWEEEG VSWLEITLRD PAYPLLVRLA 
YGLHEGYDLL ERYAEVVNES GEPVQLEEVL SAAWHLPPGG GYTLVHLAGR WGAETQVIEE 
PVTPGKKVLE SRRGHTSHFA NPWYAITRGK PLEESCEVWF GAVAWSGNWK LAVEADTTGR 
VQVSGGINDF DFAWRLGPGE SFRTPSFFGG FTSGGLGDAS RVLHRFERER VLPREFASQP 
RPVLYNSWEA TGFDINEENQ SRLAEIAASL GVELFVVDDG WFGARDSDRA GLGDWTPSPK 
KFPQGLGPLI QRVKDLGMAF GLWVEPEMVN PDSDLYRAHP DWVYHFPKRP RTESRNQLVL 
NLARPEVEEH ITSVLDKLLS EYDIDFIKWD MNRPFSEPGW PDAPPERQRE VWVRHVQAVY 
RILRTLRERH PRVAFESCSG GGGRVDLGIM ALTDQVWTSD NTDAYDRLWI QEGYSMAYCA 
RTMMCWVTDS PSHFSNRAVP LRFRFHCAMM GGLGIGGNLL KWSEPELEEA RRLVARYKEI 
RHIVQFGDQY RLSSPRKGDV TAVQYVSPER GESVCFVLRP VHRLMDPMPR VRLLGLDPDA 
TYQVEPLGVK LRGDVLMAHG LELPLWGDWA SELLWLRRG