| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2278 |
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| Symbol | |
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| ID | 8640307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobaculum terrenum ATCC BAA-798 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013526 |
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| Strand | + |
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| Start bp | 424380 |
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| End bp | 428303 |
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| Gene Length | 3924 bp |
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| Protein Length | 1307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003323999 |
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| Protein GI | 269839307 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.792883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGCT ATCGTCTGTA CGTGTGCCTG GTGGTCGTGA TGCTGCTGAT GGGCTTCCTG
CGCTCCTCCC CTGCGGCGGC ATCTCACGTC CCGTTCAGCA CCGCCACTGT GGCTGGCAGC
TTCCAGAGCG AGATAGGTTG TCCCGGCGAC TGGCAGCCGT CGTGCGACCT CTCCCTCATG
AGCGATCCCG ACGGGGATGG GGTGTACACC TTCACGATCC CGGCCGGCAC GTTGCCCGTC
GGCGCCTACG AGTACAAGGT CGCCCTCAAC AGGTCCTGGG ACTACAGCTT CCCGGCCAAC
AACCAGCGCT TCGAGGTAGC CGCGGCCGAC AACAGCGTCA CCTTCTACTA CAACTCGGCC
ACCCACGAGG TGCGCCACGT GGTGGAGGGC ACGCGGCCTC CGAGGATAGG GGATGACGAC
GTCTTCTGGG ACGGCCTCCG ACACGACAGC CGCGATACCC TCTACAGAGT GCCCTTCGGG
GCCGTGCCCG AGGGCGCGGA GTTCCTCGTA CGGTTCCGCA CCTTCCACGA CGACGTGTCG
AGCGTGACCG TGCGCGTGTG GCACACCGGC CTCAACGCCG AGAGGCTGTA CGACATGCAG
CGGGTGGCGC AGGACGTCTC CTGCTACCAG GACCTGCCAT TTAATTGCGA CTTCTGGCAG
GCCAGGATAG AGGCCGGCCC GATCGGCACC ATCTACTATC GGTTCATAGT CCGCGATGGC
TCGAAGGTGG TGTACTACGA GGACGATAGC GAGGTTCGCG ACGGCGGCAT GGGGCGCCCA
TTCGACCAGT CGCCTGACTG GGGATGGGCG GTGACGGTGC ACCGCCGCGA CTTCCTGCCG
ATCACCTGGA TGAAGAACGC CGTGGTGTAC CAGATCTTCC CCGACAGGTT CCGCAACGGC
GATCCCTCCA ACGACCCCAA GCCCGTGCGG GGTAACCCGA GGTTGAGCAG CGACCCCCGT
TACGCCTACC CCAATGGGGA TCCCACGGGC GCCAGCCGCC CCGAATGGGA CCAGATCCTG
CGCATGCGGT GGGGGGAGCT GCCCGAGGGC TATTGCCGGA ACTACGCGGG AGACTACCCC
TGCCCGCAGA GGTTTGCGCA GCCAGCATCC ACGCGGGAGC AGCCCCGCGG CCGCGACTAC
TATGGCGGCG ACCTGGAAGG GGTCACCGAG AAGCTATCCT ACCTCAAGCG CCTGGGGGTG
ACCGCGATCT ACTTCAACCC CATATTCGCC GCGGGCTCCA ACCACCGCTA TGACACCCGC
GACTACAAGA TCATCGACCC CTACCTGGGC AACCTGGGCG ACTGGCGGAC GCTCGTGCGC
GCCGCCCATA GGCAGGGGAT ACGCATCATC CTGGATGGGG TGTTCAACCA CATGTCGTCC
GACAGCCCCG TATTCGACCG CTACCACAAC TGGAACGATG CCCTGTACGG AGTCGGGGCG
TGCGAGAGCG TGAGCTCGCC CTACCGGAGC TGGTTCCGCT TCCGCCGGCC CGTGGGGAGC
GAGCCGGCTG CCTGCGCGCC CTACACGCGC GATGGGGACT CCTACTACGC GGCGTGGGCG
GGCTTCGATT CCCTGCCGCA GCTTGCCGAG AGCGACCCAG TCAAGGCCCA CATCTACGGT
GCGGACTCGA GCGTGGCCCG CTACTGGCTC CGCCAGGGTG CCGATGGCTG GCGGTTGGAC
GTCATGCCCG ACAAGAGCGT GGCCTTCTGG AGGGAGTTCA GGCAGCGAGT GAAGCAGGTG
GATCCCAACG CCGTGATCAT CGGCGAGCTC TGGAAGAAGT TCGACGTCCT GCCGTTCGTG
CAGGGCGACA CAGCCGACAC TACGATGAAC TATCGCTTCC GCGACGCGGT GATCTCGCTG
CTGGCCCCGG GCCCGTTCGA CGGCAAGGGT TTCCCTGGCA GCGGCCAGCC CATCAGGCCG
TCGGAGTTCG TCAACCGGCT GCAGTCCATC AGGGAGGACT ACCCCGATGC GACCTACTGG
ACGCTGATGA ACCTCCTGGA CTCCCACGAC ACGGAGCGCG TGCTGTGGAC GCTGACGCCG
GGCGTGGAGA ACCCCGACGG CCGCGAGCGC AACTCCGCCC ACCTGGCGGA GGGCAAGACC
CGGCTTCGGC TGGCAGCGCT CATCCAGATG ACCATGCCCG GGGCCCCCAC GATCTACTAC
GGCGACGAGG TGGGCCTGAC GGGAGATGAC GACCCCGACG ATCGGCGCAC ATTCCCGTGG
GGGGATCGCG AGGCGCGCGC CGAGGGCGAC GAGCGCCAGC CCGACATGGC GATGTACCGC
TACTATCGCG ACCTGATCCA CGAGAGGCGC AAGCACCCCT CGCTGGTGAA CGGCGACCTG
CGGTTCCTGC TGGTGGATGA CGATGCCGGC GTGGTCGCTT ACGGCCGCAA GTGGCGGGAC
GAGGCCTCGA TCGTGGTGCT CAACACCTCC AAGCAGGCCA GGCAGGTGAC CGTCCCGGTG
GTGGGCTACC TGCCGGAGAA CACCGAGCTC TCGTGGCTCG TGGGCGGCCA CGGCGAGGCC
TACGTGCGCA ATGGCGGAGT GATCCTCAGC CTCGGCCCGC TGGCCGGCGC GCTGCTCGTG
ACGCGGGACG CCGACCTGAC CCCCACGGCC GCACCCAGTG GGCTGCAGGC CTCGGCCGAC
GGTATGCAGG TCCACCTCTC CTGGCAGCCC GTGGCCGGCG CGGTGGGCTA CAACGTCTAC
CGGAGCCCGG TCACCGGTGG AGGGTACGTC AGGGTCAACG CGGCGCCTGT GACCACCACG
GGCTACCTGG ACGACAGCGC GGAGCTGCGC AGCGGCCAGA AGTACTACTA CGTCGTGCGC
GCGCTCGACG GCGTCGGCAA CGAGAGCGCC AACTCCAACG AGGCCAGCGC CACCCCCGGC
TACAGGATCG GGTGGGCCAA CCTCCAGTGG CCTCATAGCC TGGACTACAC CGTGAGCGCC
CGCTACACCA CCGACACGGT CTACGGCCAG GTCTGGATAG ACGGCGTCAC CAACCAGCCG
GGGCCCACGC CAGGGTTGAT CGCGCAGCTC GGGTACGGGC CCCAGGGCAG CGACCCAAGG
AGTTGGGACA CCTGGGTGCC GATGCAGTTC AACACGGACG TGGGCAACAA CGACGAGTAC
AAGGGCGTGC TCCAGCCGGA CACGCCCGGC ACCTACGACT ACCTGGTGCG GTACAGCACG
ACAGGCGGGG AGAGCTGGAC CTACGGCGAT ATAGACGGCA CGGAGAGCGG CAGCTTCCAG
GACCAGGTGG ACAGCCCGGG CACGCTGGTG GTGCATCCCA ACCCCGACCA GACGCCGCCG
GAGGCGCCCA CCAACCTGCG AGCGTACAAC AACGGCCCCA GCTCGATCCT CCTGGACTGG
GACGCGTCCA CGTCGCTCGA CGTCTATAGG TACGACGTCT ACCGGAGCAC GCAGCCCGGC
GGCCCCTACG ACAGGGTGGG GTCCACCGAC GCGGCCATCA CGCAGTACGC CGATTCGGGG
CTGCAGACCG GCACCCGCTA CTACTACGTG GTGAGGGCGG TGGACGAGGC CGCCAACGTC
TCCGCCCCCA GCAACGAGGC GAGCGCCGTG CCGAGCTCGC GGCAGGTGGC CGTGACCTTC
GAGGTGGCGG TGCCCGCTAC CACCCCGCCC GACGCCACCG TGTACATCGT GGGCAACCAG
CCGCAGATCT GCAACTGGTG CAACCCGCAC ACGGTCGCAT TGACCAAGGG GGATGACGGC
AAGTGGAGGA TAACGCTGGA GTTCACCGAG GGGACGTCCG TGGAGTACAA GTACACGCTG
GGCTCCTGGG ACTACGTGGA GAAGGGGCCC TCGTGCGAGG AGATCTCCAA CCGCACCCTC
AGGGTCGTCG GGGACTCGGA GGGCAGGCAG CTCGTGCAGG ACACGGTGGC CAACTGGAGG
AACATCTCGC CCTGCGGCAA CTAG
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| Protein sequence | MRRYRLYVCL VVVMLLMGFL RSSPAAASHV PFSTATVAGS FQSEIGCPGD WQPSCDLSLM
SDPDGDGVYT FTIPAGTLPV GAYEYKVALN RSWDYSFPAN NQRFEVAAAD NSVTFYYNSA
THEVRHVVEG TRPPRIGDDD VFWDGLRHDS RDTLYRVPFG AVPEGAEFLV RFRTFHDDVS
SVTVRVWHTG LNAERLYDMQ RVAQDVSCYQ DLPFNCDFWQ ARIEAGPIGT IYYRFIVRDG
SKVVYYEDDS EVRDGGMGRP FDQSPDWGWA VTVHRRDFLP ITWMKNAVVY QIFPDRFRNG
DPSNDPKPVR GNPRLSSDPR YAYPNGDPTG ASRPEWDQIL RMRWGELPEG YCRNYAGDYP
CPQRFAQPAS TREQPRGRDY YGGDLEGVTE KLSYLKRLGV TAIYFNPIFA AGSNHRYDTR
DYKIIDPYLG NLGDWRTLVR AAHRQGIRII LDGVFNHMSS DSPVFDRYHN WNDALYGVGA
CESVSSPYRS WFRFRRPVGS EPAACAPYTR DGDSYYAAWA GFDSLPQLAE SDPVKAHIYG
ADSSVARYWL RQGADGWRLD VMPDKSVAFW REFRQRVKQV DPNAVIIGEL WKKFDVLPFV
QGDTADTTMN YRFRDAVISL LAPGPFDGKG FPGSGQPIRP SEFVNRLQSI REDYPDATYW
TLMNLLDSHD TERVLWTLTP GVENPDGRER NSAHLAEGKT RLRLAALIQM TMPGAPTIYY
GDEVGLTGDD DPDDRRTFPW GDREARAEGD ERQPDMAMYR YYRDLIHERR KHPSLVNGDL
RFLLVDDDAG VVAYGRKWRD EASIVVLNTS KQARQVTVPV VGYLPENTEL SWLVGGHGEA
YVRNGGVILS LGPLAGALLV TRDADLTPTA APSGLQASAD GMQVHLSWQP VAGAVGYNVY
RSPVTGGGYV RVNAAPVTTT GYLDDSAELR SGQKYYYVVR ALDGVGNESA NSNEASATPG
YRIGWANLQW PHSLDYTVSA RYTTDTVYGQ VWIDGVTNQP GPTPGLIAQL GYGPQGSDPR
SWDTWVPMQF NTDVGNNDEY KGVLQPDTPG TYDYLVRYST TGGESWTYGD IDGTESGSFQ
DQVDSPGTLV VHPNPDQTPP EAPTNLRAYN NGPSSILLDW DASTSLDVYR YDVYRSTQPG
GPYDRVGSTD AAITQYADSG LQTGTRYYYV VRAVDEAANV SAPSNEASAV PSSRQVAVTF
EVAVPATTPP DATVYIVGNQ PQICNWCNPH TVALTKGDDG KWRITLEFTE GTSVEYKYTL
GSWDYVEKGP SCEEISNRTL RVVGDSEGRQ LVQDTVANWR NISPCGN
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