Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tter_2110 |
Symbol | |
ID | 8640139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobaculum terrenum ATCC BAA-798 |
Kingdom | Bacteria |
Replicon accession | NC_013526 |
Strand | - |
Start bp | 244245 |
End bp | 245960 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003323834 |
Protein GI | 269839142 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.147486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTGA TAGAGATCGC GGACGTAGCC TTCACCTACG CCGCCCAACC GGGAGTGAGG GCGCTGGACG GCGTGAGCTG CGTCATCGAG CGCGGCAGCT TCGTGGGGAT CACGGGCCCC GCGGACGCGG GCAAGACCTC CCTCTGCCGC CTCATCGCCG GCTACATCCC GCACTTGTTC GACGGCGAGC TCTCCGGTGA GGTGGTCGTG GACGGAGCGC CCACCCGGCG GGTGCCCGTG GAGGAGCTGG CGGGCAAGGT GGGCTACGTG TTCGAGAACC CGTTCGACCA GCTCACCGGC GCCTCCCTGA CGGTGCTGGA GGAGGTGGCG TTCGCGCTCG AGAACATGGG GCTGCCGCGC GAGGAGATCG AGCGCAGGGC ATGGGAGAGC ATGCGGCTGA TGGGCATAGA TCACCTGGCG GATCGCCACC CCATGCGCCT GTCGGGTGGG CAGTCTCAGC GGGTGGCCAT CGCCTCCGTG CTGGCCATGC GCCCCGAGAT CCTCCTCCTG GACGAGCCCA CCTCCCAGCT CGATCCCGTG GGCGCGGAGG AGGTGTTCGA GACGGTGCTT AAGCTGCACC AGCAGGGCCT CACCGTGATC ATGGTCAGCC AGGACTTGGA GAGGCTCTCG AGGTACGCCG ACCGCCTGTT GGTGATGCGG GGCGGCAGGA TAGTGCTGGA GGGCGAGCCC CGAGAGGTGC TGGGGCGGGC GCTGGCGTCG GGGCTGCCGC TCGTGATGCC CGTGCCCGCC GCGGTGGGCT GGCAGCTGCG TCAGGCCGAG GCGGTCCCCG TGTCCCGGCC GCTGCCCCTC ACCGTTGAGG AGGCCGCGGC GGAGATCGAG GGGGTGCTGC AGGCGAGGGG CTCCGACCTC CAAGCCGTCG ACCCCGTGCG CGAGGGCCGA TCGGGCGAGC CGCAGGTGAG GCTGGAGGGG GTAAGCTTCT CCTACGGGGG CCAGGTGAGG GCGCTGGAGG ACGTGTCGCT GGAGATGGAT GCGGGATGCG TCTGCATCCT GGGGCAGAAC GGCTCGGGCA AGACCACGCT CATGAAGCAC CTCAACGGCC TCCTCAAGCC CAGCAGCGGG CGGGTGCTCG TGCGCGGGGA GGACACGCGA GACCACCGCG TGGCCCACCT GGCGCGCCAC GTGGCGCTGG CCTTCCAGAA CCCCGACGAC CAGCTCTTCC GGAGCAGCGT CGAGCGGGAG GTGCGCTTCG GCGCGGAGAA CATGGGCTTC CCTCCCGAGG AGGCCGAGAA GCTGGTGGAG AGGGCGCTCG ACCTGCTGCA GCTGCGGGAT GTCAGGCACC GCAAGCCCTA CGACCTGGGG CTCTCGTGGC GCAAGCGGGT GGCGATCGCC TCGGTGCTCA CCATGGCCTC GCCGGTGGTC GTGCTCGACG AGCCCACTGG GGGTCAGGAC GCCGAGGGGA TACAGCTCCT GGGGGCGCTG GTGGAGCACC TGGTGGGGGA GGGGAAGCTG GTCGTGGTGG TCACCCACGA CGTGGAGTTC GCCGCCGAGC ACGCCGACCG CGCCATCGCC CTGCACGCGG GGAGGGTGCT GCTCGATGGC GGGCCCAGAG AGGTGTTCGC GCAGGCGGAG GTGCTCGCCC GCACCCACGT CCACCCGCCG GCAGCGCTGC TGATAGGCCA GCGCCTGGGG CTAGCCCCCC TGCCCCTCAC CCCACAGGAG CTACTGGCGG CCGTCGGCAT CGCCCGGCAG CGCTAG
|
Protein sequence | MSLIEIADVA FTYAAQPGVR ALDGVSCVIE RGSFVGITGP ADAGKTSLCR LIAGYIPHLF DGELSGEVVV DGAPTRRVPV EELAGKVGYV FENPFDQLTG ASLTVLEEVA FALENMGLPR EEIERRAWES MRLMGIDHLA DRHPMRLSGG QSQRVAIASV LAMRPEILLL DEPTSQLDPV GAEEVFETVL KLHQQGLTVI MVSQDLERLS RYADRLLVMR GGRIVLEGEP REVLGRALAS GLPLVMPVPA AVGWQLRQAE AVPVSRPLPL TVEEAAAEIE GVLQARGSDL QAVDPVREGR SGEPQVRLEG VSFSYGGQVR ALEDVSLEMD AGCVCILGQN GSGKTTLMKH LNGLLKPSSG RVLVRGEDTR DHRVAHLARH VALAFQNPDD QLFRSSVERE VRFGAENMGF PPEEAEKLVE RALDLLQLRD VRHRKPYDLG LSWRKRVAIA SVLTMASPVV VLDEPTGGQD AEGIQLLGAL VEHLVGEGKL VVVVTHDVEF AAEHADRAIA LHAGRVLLDG GPREVFAQAE VLARTHVHPP AALLIGQRLG LAPLPLTPQE LLAAVGIARQ R
|
| |