| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2005 |
|---|
| Symbol | |
|---|
| ID | 8640034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013526 |
|---|
| Strand | + |
|---|
| Start bp | 128619 |
|---|
| End bp | 129578 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein |
|---|
| Protein accession | YP_003323731 |
|---|
| Protein GI | 269839039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0306865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCTG AGCGCAGGTG GAGGGTGTTG ATAGGCTCGA GGTCCTTCGG CCAGGCCGAT
CCCTCGCACA TCCGGCAGCT GGAGGAGGCG GGCTGCGAGG TGGTGCCGAA CTCCTTGGGC
AGGGCCTACA GGGAAGAGGA GCTGCTCGAG CTGCTCCCGG AGATGGACGC GATCATCACG
GGCACGGACG AGCTCACCGC CCGGGTGATA GAGGCGGCGG GTCGCCTGAG GACCATCGCC
AAGCACGGCG TGGGACTGGA CAATATAGAC CTGGAGGCCG CCAGGCGGCG GGGAATAGTG
GTGACCGCCA CGCCCGGCGC CATCCACGAC TCCGTGGCCG ACCTGACCAT GGGGCTCATC
ATCGCCGTGG CCAGGCAGAT CGTGCCCGCC CACAACTCGA CGGTCGCTGG GGAGTGGCGC
AACTTCGTGG GCCTGGAGCT GAGGGACAAG ACGCTGGGGA TAATAGGCCT GGGGCGGATA
GGCAAGGGGG TGTGCCTGCG GGCGCTGCCG TTCGGGATGA GGGTGGTGGC CTACGACCTC
TATCCAGACG AGGAGTTCGC GCGCGCGCAC GGAGTCAGGT TCGTGGGGCT GGAGGAGCTG
CTGGCTACCT CGGACGTGGT CACCCTGCAC GCCTCCGCCG GCAACGATGG GAGGCTGCTG
GGGCGCCGCG AGATCGGCCT GATGAAGCCT GGGGCTATAT TTATCAACAC GTCTCGTGGT
AAGTTAGTGG ACGAGGGAGC GCTCTGCGAG GCGCTGGCCG TCGGCAGGCT GGCTGGAGCG
GGGCTGGATG TGTTCGAGGA GGAGCCCCCC AGAGGGCCTC TGCTGGAGCT GCCGAACGTC
GTCCTGACGC CCCACATAGC GGGCCAGACC AGGGAGGGCA TGATCAGGAT GGGAGAGATG
ACCGTGCAGA ACTGCCTGCG AGCCCTGCGA GGCGAGGAGC CTCTATACAG GGTGGTATGA
|
|---|
| Protein sequence | MSAERRWRVL IGSRSFGQAD PSHIRQLEEA GCEVVPNSLG RAYREEELLE LLPEMDAIIT
GTDELTARVI EAAGRLRTIA KHGVGLDNID LEAARRRGIV VTATPGAIHD SVADLTMGLI
IAVARQIVPA HNSTVAGEWR NFVGLELRDK TLGIIGLGRI GKGVCLRALP FGMRVVAYDL
YPDEEFARAH GVRFVGLEEL LATSDVVTLH ASAGNDGRLL GRREIGLMKP GAIFINTSRG
KLVDEGALCE ALAVGRLAGA GLDVFEEEPP RGPLLELPNV VLTPHIAGQT REGMIRMGEM
TVQNCLRALR GEEPLYRVV
|
|---|
| |