Gene Tter_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_1855 
Symbol 
ID8646370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013525 
Strand
Start bp1996281 
End bp1997525 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content49% 
IMG OID 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_003323583 
Protein GI269926960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTTTTA GGAAGAAAGG GAGTAATCCC CTAATACTGT TCCTCAGCTT TATGCTCATA 
CTTGTTGTAG CTTTTGCGCT GGGTCGATGT GGCAACGACT TAGCTCCCGA AGGCGTCACC
CCTTCACCTA CTGTAGGCGC CTCGCATGCT TCTCCAGGTT CTAGTAATTC AGCAGTCCAT
TCACCAACGC CAGCGGCTGG CGCGCAAGTT ACTCCAACGA AACCAGCAAG CGTGCCTCCG
AGCCCTGCTC CGACTCAGCC AACTAGAGAG CCCACGAGGA ATCCAAACAG GAGCCCTAGA
CCTACAGCCA CTCCAAAGGA GAAAAATAGA GCTAGGTACT ATGTCGTGGT TGCAGGGGAT
ACTCTCTGGG GTATAAGTAG AAAGTTTGGG ATCACAGTAG ATGACCTGGC TCGTGCTAAT
GGTCTTAGTG TCAACGCTAC TTTGCAGGTT GGGCAAAGAC TTATAATTCC TTCAATGGAT
GAGGATTCTG ATTTTGAGCT TCCTCCCATA ACCAATAGGC TTGATGCCCC TAAACAAGCC
AATCTTAGAT CCATAGCCCC AGATCTTGTG GAATATCTTA CATCTCGACA GGGTGTATCA
GCTGCGGCTG TATATCTGCC CGAGACCGAC ACTATCTATA CATGGAATAC CAATATAAAG
TTTCAGATGG CTAGTACAGT AAAGGTTCCA ATCATGGTTA CACAACTGAG CCAACAGTAC
AGGCGCGATC CTTCGGCCTC ATCTCCAGGC ACTGATCTGC TGGTACCGAT GATAACGGTT
AGCGATAACG ATGCCGCTAC AGCCCTGCTT AATGCTGTTG GAGGTCCTGC TGCTGTTGAG
CGTGAGCTAA ATCGCAGGGG AATTACACAT ACAGACATCA ATCCTAATGC TTGGGGGCTA
AGTACGACCA CTGCTCCTGA TATGGTAATG CTTCTTAGAA GCCTTTACTA TGGTCAGTAC
CTCAATGAGC CGTTACGAGG CGTGGCCATC CGTCTTATGG CATCAATAGT ACAAGACCAA
CGCTGGGGGG TGCCTCAGGG ACTCCCTGCA GGTACGCCGA TAGCCTTCAA GGGTGGTTGG
CTACCACTTG ACGATGGCTG GCTAGTGCAT CAGATAGGTA TCACCGAAGT GAAAGGCAAA
ACTGTCATAT TTGCTTTCTA TAATAGTAAG CAGCCTACTT GGGATTACGG AAAGGATACG
TTGCGCAACT CTGCCATGAT TCTCAGTAGA GAAGATCTAC CATGA
 
Protein sequence
MLFRKKGSNP LILFLSFMLI LVVAFALGRC GNDLAPEGVT PSPTVGASHA SPGSSNSAVH 
SPTPAAGAQV TPTKPASVPP SPAPTQPTRE PTRNPNRSPR PTATPKEKNR ARYYVVVAGD
TLWGISRKFG ITVDDLARAN GLSVNATLQV GQRLIIPSMD EDSDFELPPI TNRLDAPKQA
NLRSIAPDLV EYLTSRQGVS AAAVYLPETD TIYTWNTNIK FQMASTVKVP IMVTQLSQQY
RRDPSASSPG TDLLVPMITV SDNDAATALL NAVGGPAAVE RELNRRGITH TDINPNAWGL
STTTAPDMVM LLRSLYYGQY LNEPLRGVAI RLMASIVQDQ RWGVPQGLPA GTPIAFKGGW
LPLDDGWLVH QIGITEVKGK TVIFAFYNSK QPTWDYGKDT LRNSAMILSR EDLP