Gene Tter_1355 details

Gene Information

• Locus tag: Tter_1355
• ID: 8645851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013525
• Strand: +
• Start bp: 1465410
• End bp: 1468862
• Gene Length: 3453 bp
• Protein Length: 1150 aa
• Translation table: 11
• GC content: 48%
• Product: transcription-repair coupling factor
• Protein accession: YP_003323084
• Protein GI: 269926461

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACAA AGCCTCTAAT AGAACTACTA TCTAAGTCCA ATCAAATCCA GCATCTAAAG 
GCACAACTCA GTAGAGGAGA AAAGGTCTGT TATCTTCCAT CTGCTGTCCC TTCTGCCTAC 
CCAGCTTTGT GGGCAACATT ATTTGCCGAG ATGCACACAG ACACTCTGTT GATAGTGCCA 
AGGCCAGAAG AAGCTCAGAA CGTAGCTGAC TCTCTATCTA CATACCTATG GGATCCTAAG 
AGGGTACTGC TATGGCCGGC ACACGATGAT CTACCTTATG AGAGAATAGC TAGTCCAACT 
CAAGACTCTC CATTCAGAAG GCTATCAGCC TTGGAGCGAA TATTACGAAC AGATAGGGAG 
CCACTGCTAA TCGTCGCAAG CGTTAAATCC ATCTTGGAAC CCACGTTGGC TCGACGCTAC 
TTTGAGGATC ATAGAGAGTT TGTCAAGACA GGAGACGCTG TAGATATCAT TGCCTTGGCT 
AACAGAGTGG CCGAGCTCGG TTATTCACCC GTTGCCAGTG TCGAAGAAGT CGGTCAGTTC 
TCACGGCGAG GCGGTATCTT TGACATATGG ACACCATCAT CAGATCTGCC AATTAGATTA 
GAACTCTTTG GCGATGAAGT TGAAAGCATA AGGCTGTTTG ATCCAGAAAC ACAAAGATCC 
ACCCGAGAAA TAGAATCATT CTCTATAATT TCGCCATACG AGATACCAGT TGCTGAGTAT 
GAGTCAGCAC TGGAACGCCT TCAGCAGATA GATCTGTCTA ATCTGCGCCA TGAAGTAACA 
TCCAGCTGGA AACAATCCCT GGAAAAGCTA TCAGCAGGTG ACCTTCCGGC CATACATAGC 
ATAATAGCTC CATACTTTCC AAGTGGCCTG GGTAATCTGC TTGACTACCT TAGCGAAGGC 
ACTATAGTCT TCACCGATCT GCCTGACAGG CTTGCGCTTA CAGCGAGCAC CCTGCGTTCA 
CACATTGAAG GTATGCGACT GGAGATGGAG CAGTCAGGGG ATATACCCTC GAACCTGCTT 
AGTCCTGTAT TTGAATGGAG CTATATAGAG GATAGACTCA AGGCGCTACC GAAGATAGAA 
CCTGTCAATT CGGCTGAGGG AAACCTTAAA TTCTATCCCG CTCCACAGAT TAGATCCAGC 
ACCATAGACA TAGTGGATAA CCTGCGATCT TGGATTGACG AGGGTAGAAC TGTATTTATC 
GTAACACGGC ACCACGAGAG AATCCGCCAC GTAGCCAAAG AGCACAACTT GCCACTGGCA 
CTAGATGAAG ATGTTAAACA GGGGCAGATG TTCATAGTAC CTGGCTCCAT TCAAGATGGT 
TGGATATGTG ACGATATCAA TCTGGTGGTT CTTTCAGACA CTGAACTTTG GGGCTATAGG 
GAGCCAAGAA GGGCACGCTC TCCAAGGAAA GCTCCTCAGA GAGTCTTCCT AGCTGACCTC 
CAGCCAGGTA GCTACGTAGT ACATGTAGAC CATGGGGTAG CTAAGTACGT AGGCAATGTT 
ATGAGAGGTA GCTCGGGAGC AGAACGAGAG TACCTGGTGT TGGAGTATGC CGGAGGGGAC 
AGACTATACG TACCCGTAGA TCAAATAGAT AGAATCTCTC CATACATTGG TGGAGGTGAG 
CCTGCGCTCA GTCGGTTGGG AACCGCCGAC TGGGCGCGTA CCAAAAGAAG AGCCAAGAAG 
GCAGCAGATC AACTAGCTAA AGAGTTACTT CAGCTATACG CAGCCCGAGA GATAGCCAAG 
GGTCATAGCT TTTCTCCAGA CAATGAGCTC CATAAAGAGT TCGAAAGTGC GTTCCCTTAC 
GTGGAAACGG ATGATCAATT GGCAGCCATT GAAGATGTCA AGGCCGATAT GGAATCGCCA 
AAGCCTATGG ATAGGTTGAT ATGCGGAGAT GTGGGGTACG GCAAAACCGA AGTGGCGCTT 
AGAGCTGCAT TCAAGGCTGT GGCAGATGGC AAACAAGTCG CAGTACTCGT CCCCACAACC 
GTGCTTGCAT TGCAGCATTA TGAGACCTTT AGATCCAGAT TTAACCCATT TGGCATACGA 
GTTGAGATGC TGTCCAGGCT ACGGACCAAG AAGGAGAGGG ACCAAGTCCT GGAAGATTTG 
CAGAAGGGTA ATGTTGATAT AGTTATAGGC ACGCATACCA TCCTTCAAAA AAATGTAGTT 
TTCAAGGACC TTGGGCTAGT CATAGTAGAT GAGGAGCAAA GATTTGGCGT CAAGCACAAG 
GAGACGCTTA AGCAGATACG TACTCAGGTA GACGTGCTGA CTCTTACAGC CACCCCTATA 
CCCAGGACTC TGCAAATGGC GCTTTCGGGA GTGAGGGATA TGAGTGTGAT AGAAACTGCT 
CCCGAGGATC GCTTGCCTGT ATACACCTAT ATTGTTCCGA AGAATGACAG CATTATCAGG 
GACAGTATCA TAAGGGAGTT GGAACGAGGC GGTCAGGTCT TCTACGTGCA TAATAGAGTG 
CAGGACATCT ACAAGGTAGC GCACAAACTA CAAGAGATGG TGCCAGAAGC TCGCATCACT 
GTTGCCCATG GTCAAATGCC AGAACAGCAG CTAGAGCAGG TAATGCTGGA CTTCATGCAT 
CACCATTACG ATGTTCTAGT ATGTACCACC ATTATCGAGT CAGGATTGGA TATCCCCAAC 
GCTAATACGC TAATAGTGGA CGATGCCACA CATATGGGCT TGGCTCAACT CTATCAGCTA 
CGGGGTAGAG TGGGTAGAAG CAGCAATCGA GCATACGCAT ACCTCATGTA CAGACCTGAT 
GCCAGGATGA CAGAGGATGC ACAGAAAAGA CTGGAAGCAA TTTCAGAAGC TACGCAGCTG 
GGTGCTGGCT TCCGAGTAGC TATGAAGGAC CTTGAGATAA GGGGAGCAGG CAATTTCTTG 
GGGCCAGAGC AAAGCGGGCA TGTTTATGCC ATTGGACTAG AGCTTTACAC CCAAATGATA 
GAGAGAGCGG TACAGGAACT GCGTACAGGA CAACCCATAA GTGAGCCCCC AGCAGTAACG 
ATAGATCTAC CGATTCCAGC TCTGATACCC GAACATTACG TCTCTGATAG AGACACCAGA 
ATCAGGTTGT ACAGGCGATT AGCATCTACA TCAACGGCAC GTGAGCTTAG ATCGATGGAA 
AGCGAGATGC GAGATAGGTT CGGACCGCTA CCTGAAGAGG CTATCAACCT GATCAAGCTC 
ATAGATCTCA AGATAGTAGC AGCAAAAGCA GGTGTCACTG CAATACGAGC AGCTGACAAC 
GAAGTAATAA TCAAGACTGA CAACCCTCCA CCTGCTGAGA GGCTGGCACA TTGGCGAGGA 
GTTAGAGTAG TGCCTGGTCA GGTAAGAGTA GAGATTAGTG GCAAGCCCGA TCGATGGCTT 
ACTAGGTTAA GGTCCGTACT ACTTCAGATG TCCTACACGC CCGAGGAGTA TCAGTCAACC 
GGCCTGGAAG ATAGGATGGT TAGCGGGAGA TAA 

 

Protein sequence

MTTKPLIELL SKSNQIQHLK AQLSRGEKVC YLPSAVPSAY PALWATLFAE MHTDTLLIVP 
RPEEAQNVAD SLSTYLWDPK RVLLWPAHDD LPYERIASPT QDSPFRRLSA LERILRTDRE 
PLLIVASVKS ILEPTLARRY FEDHREFVKT GDAVDIIALA NRVAELGYSP VASVEEVGQF 
SRRGGIFDIW TPSSDLPIRL ELFGDEVESI RLFDPETQRS TREIESFSII SPYEIPVAEY 
ESALERLQQI DLSNLRHEVT SSWKQSLEKL SAGDLPAIHS IIAPYFPSGL GNLLDYLSEG 
TIVFTDLPDR LALTASTLRS HIEGMRLEME QSGDIPSNLL SPVFEWSYIE DRLKALPKIE 
PVNSAEGNLK FYPAPQIRSS TIDIVDNLRS WIDEGRTVFI VTRHHERIRH VAKEHNLPLA 
LDEDVKQGQM FIVPGSIQDG WICDDINLVV LSDTELWGYR EPRRARSPRK APQRVFLADL 
QPGSYVVHVD HGVAKYVGNV MRGSSGAERE YLVLEYAGGD RLYVPVDQID RISPYIGGGE 
PALSRLGTAD WARTKRRAKK AADQLAKELL QLYAAREIAK GHSFSPDNEL HKEFESAFPY 
VETDDQLAAI EDVKADMESP KPMDRLICGD VGYGKTEVAL RAAFKAVADG KQVAVLVPTT 
VLALQHYETF RSRFNPFGIR VEMLSRLRTK KERDQVLEDL QKGNVDIVIG THTILQKNVV 
FKDLGLVIVD EEQRFGVKHK ETLKQIRTQV DVLTLTATPI PRTLQMALSG VRDMSVIETA 
PEDRLPVYTY IVPKNDSIIR DSIIRELERG GQVFYVHNRV QDIYKVAHKL QEMVPEARIT 
VAHGQMPEQQ LEQVMLDFMH HHYDVLVCTT IIESGLDIPN ANTLIVDDAT HMGLAQLYQL 
RGRVGRSSNR AYAYLMYRPD ARMTEDAQKR LEAISEATQL GAGFRVAMKD LEIRGAGNFL 
GPEQSGHVYA IGLELYTQMI ERAVQELRTG QPISEPPAVT IDLPIPALIP EHYVSDRDTR 
IRLYRRLAST STARELRSME SEMRDRFGPL PEEAINLIKL IDLKIVAAKA GVTAIRAADN 
EVIIKTDNPP PAERLAHWRG VRVVPGQVRV EISGKPDRWL TRLRSVLLQM SYTPEEYQST 
GLEDRMVSGR