Gene Tter_1280 details

Gene Information

• Locus tag: Tter_1280
• ID: 8645775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013525
• Strand: -
• Start bp: 1385696
• End bp: 1387672
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 47%
• Product: excinuclease ABC, B subunit
• Protein accession: YP_003323010
• Protein GI: 269926387

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGAGT TCAAGATAAT ATCTGACCTT CGGCCTGTAG GTGATCAGCC CAAGGCTATA 
GAAGCCTTGG TGGAAGGCGT TAGAGCCGGG ATGAGGCATC AAACGTTGCT TGGGGCAACA 
GGAACCGGCA AGACTTTTAC AGTCGCTAAC GTTATAGAAA GGCTTCAGCG TCCAACTCTT 
GTTATAGCTC ATAACAAAAC CCTGGCAGCA CAGCTATATG CTGAGTTCAA AGAATTTTTC 
CCCAACAATG CTGTAGAGTA CTTCGTTAGC TATTACGATT ATTATCAACC TGAGGCCTAC 
ATCCCGCAGA CCGATACTTA CATAGAAAAA GACACTGAGA TAAATGATGA GATAGACAAG 
CTGCGTCATG CCGCTACAAT GGCTCTTTTA GAAAGGCGAG ATGTCATAAT CGTTGCCAGT 
GTGTCCTGTA TATACGGACT TGGATCTCCT GAAGAATACA GCAAGTTTGT TATATCCCTC 
AAACGTGGCG ATACTGTGCG GCTCAGTAAG GTCATCCGTC GTCTTGTAGA GGCTCAATAT 
GAGCGTAATG ATCAATCTTT GTCGAGAGGT ACGTTTAGAG TTAGAGGCGA TACTCTTGAG 
ATACAGCCTG CTTATGATGA GGTTGCGCTA AGGATTGAAT TCTTTGGAGA CGAGATAGAT 
AGAATTACCG AGATAGATCC TCTTACTGGC GAGGTGCTTA TTGAGCGCAC CAAGGCGGAT 
ATATATCCAC GAAAGCATTT TGTGACCTCT CAAGAGAGAC TCCAAGAGGC TATCAAGGCT 
ATTAGAGAAG AGCTCGAGGA ACGCTATAAC TGGTTTATCG AGCAAGGTAA GATAGTTGAA 
GCTGAAAGGC TCAAGCAGAG GACCTTATAT GACCTTGAGA TGCTCTCTGA AGCTGGTTAC 
TGTTCAGGTG TCGAGAACTA TTCCAGGCAC CTGTCGGGAC GTAAACCTGG GGAGCCCCCC 
ATAACGTTGC TTGACTATTT CCCTGACGAT TTCCTGCTTA TAGTTGATGA GTCTCATATT 
ACGCTGCCTC AGATCAGGGG CATGTATGCA GGCGACCGGT CGCGGAAAGA GGTGCTCGTT 
CAGTATGGAT TTAGGCTGCC TTCAGCCCTG GATAATCGTC CATTAACTTT CGATGAATTC 
CAGTCTCATA TAGTCAATGC TATTTACGTT TCAGCCACCC CTGGCCCATG GGAAGAGGAA 
CACTCAGAAC AGATAGTCCA CCAGATCATC AGGCCTACCG GTCTGCTTGA TCCGGAGATC 
AGCGTTCGTC CTACGGAAGG TCAGATAGAC GACCTCCTGG AGGAGGTGCA CGAGAGGGTA 
TCCAAGGGGC AGAGGGTGAT CATAACTACG CTCAACAAGC GTATGGCCGA AGAACTGTCT 
GATTACCTGA GCGAAATGGG TATCAAGAAC CGCTATATCC ATCACGAGAT AGATACTTTG 
GAGCGTGTTG AGATACTTCG CGATCTACGC CTTGGAGTCT ATGATGTAAT AGTGGGCATA 
AACCTTTTGA GGGAAGGACT GGATCTGCCG GAAGTCTCCT TAGTAGCTAT TCTAGACGCT 
GATAAGGAAG GCTTTTTGCG TTCCGAGAGG TCGCTTATAC AGATGATCGG TAGAGCTGCT 
CGTCATGTTG AGGGCAAGGT TATCATGTAC GCAGATACCA TCACGGAATC TATGCAAAAA 
GCTATAGATG AGACGAATCG TAGGCGGGCT ATCCAGATGG AATATAACCT CAAGCACAAC 
ATAGTGCCCG CGAGCATTGT CAAGGAAGTG CGTGATATTA CTGAGAGAGT CAAGGCTATC 
GCTGAGTCTA AGGAGCAATA TCGAGCGGAC GGTGCTGTGA ATCTGTCCAA GGATGAGATA 
TTCAGGATGA TAAAGGATCT GGAATCTCAG ATGAAACAGG CTGCCAAGGC GTTAGAGTTT 
GAGAAAGCAG CTATCTTGCG TGATCAGATA GCTGAGCTTC GCAAGATAGC TATGTAA 

 

Protein sequence

MGEFKIISDL RPVGDQPKAI EALVEGVRAG MRHQTLLGAT GTGKTFTVAN VIERLQRPTL 
VIAHNKTLAA QLYAEFKEFF PNNAVEYFVS YYDYYQPEAY IPQTDTYIEK DTEINDEIDK 
LRHAATMALL ERRDVIIVAS VSCIYGLGSP EEYSKFVISL KRGDTVRLSK VIRRLVEAQY 
ERNDQSLSRG TFRVRGDTLE IQPAYDEVAL RIEFFGDEID RITEIDPLTG EVLIERTKAD 
IYPRKHFVTS QERLQEAIKA IREELEERYN WFIEQGKIVE AERLKQRTLY DLEMLSEAGY 
CSGVENYSRH LSGRKPGEPP ITLLDYFPDD FLLIVDESHI TLPQIRGMYA GDRSRKEVLV 
QYGFRLPSAL DNRPLTFDEF QSHIVNAIYV SATPGPWEEE HSEQIVHQII RPTGLLDPEI 
SVRPTEGQID DLLEEVHERV SKGQRVIITT LNKRMAEELS DYLSEMGIKN RYIHHEIDTL 
ERVEILRDLR LGVYDVIVGI NLLREGLDLP EVSLVAILDA DKEGFLRSER SLIQMIGRAA 
RHVEGKVIMY ADTITESMQK AIDETNRRRA IQMEYNLKHN IVPASIVKEV RDITERVKAI 
AESKEQYRAD GAVNLSKDEI FRMIKDLESQ MKQAAKALEF EKAAILRDQI AELRKIAM