| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_0107 |
|---|
| Symbol | |
|---|
| ID | 8644563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013525 |
|---|
| Strand | + |
|---|
| Start bp | 117416 |
|---|
| End bp | 118735 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_003321851 |
|---|
| Protein GI | 269925228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATATCA CCATATCTCC AGCACGATCG GTCCACGGCA ATATTATGCC GCCGGGAGAC
AAAAGTATAT CCCATAGGGC AGCAATTTTT GGCGCGCTAG CCCAGGGCAC CACAGATATC
TATAATTACT CCCCAGCCCG AGATTGCCAA TCTACGCTAG AATGCCTTCT ATCTCTTGGC
ACCGGAATAC GCAGGGATGG CAACTATATT CGAGTGGAGG GCGTGGGAGA TACAGGCTTC
AAAGAGCCTG AAAGTATACT AGATTGCGGT AATTCAGGAA CCACTATGCG CCTGCTAATA
GGTGCCCTAG CCCCCATGGA CCTCTATGCT GTGCTTATCG GGGATAAAAG CCTCACAAAG
AGACCCATGG ACAGGGTACT CAAACCCCTA GGTGATATGG GACTTAGATA TTACGCTAGA
AACAAAGACA GATATCCACC AGTATCAATC AGGGGAGGCA AGATTCAGGG CATTCATTAT
CAAACTCCTG TAGCTAGCGC ACAAGTCAAG AGCGCCATAC TGTTAGCTGG TTTGAGAGCT
GAAGGGGAAA CTGTTGTAAC AGAGCCTGCC AAATCAAGGG ATCATACAGA GCGTATGCTG
AAAGCCATGG GGGCTCAAAT ACAGTCTGAT GGAACAACAG TCAGACTGGT GGCCAGCAGG
TTGTCGGCAA CCACTTTCCA TGTCCCTGCC GATCCTTCAT CAGCAGCCTT CATTCTGGCA
GCAGCCCTTA TAGTACCTGA ATCAAAAGTT ACAACAAGCA ACATATGCCT TAACCCAACT
AGAATAGGGT TCTTAAACGT GCTGGAAAGG ATGGGGGCTA ACATAGAAAT TCACAATGAA
CGAGAATCTT CAGGGGAGCC CATAGGTGAC ATAGAGGCTT CCACATCAGA ACTAAATGGC
ATAGAGATAG GGGGGACGGA GATCCCCACT CTGATAGACG AGATACCTAT ACTAGCCGTT
TTGGCTACAC AGGCAAAGGG AAGAACAGTC ATAAGGGACG CCGAAGAGTT AAGGATCAAA
GAAACCGACC GCATAAGCGT ACTGTGCAGA GCGCTACAGC AGATGGGAGC CGATATTAGA
GAGATGAGAG ATGGGTTCGA GATACATGGG CCTTGTAAAC TAAAGGGCGC TAAGGTAGAT
CCAGATCACG ACCATAGAAT AGCTATGGCT CTAGCTGTAG CCTCACTTAT AGCCGAGGAC
AAAACCACTA TCTTAGGAGC AGAATGTGCT TCAATATCCT ACCCAAACTT CTGGGATCAT
CTCTCATCTC TAGGCGTAGA GCTAAGCGGC ACACAGTCAG ATTCAAAAAC TAACGTATAG
|
|---|
| Protein sequence | MDITISPARS VHGNIMPPGD KSISHRAAIF GALAQGTTDI YNYSPARDCQ STLECLLSLG
TGIRRDGNYI RVEGVGDTGF KEPESILDCG NSGTTMRLLI GALAPMDLYA VLIGDKSLTK
RPMDRVLKPL GDMGLRYYAR NKDRYPPVSI RGGKIQGIHY QTPVASAQVK SAILLAGLRA
EGETVVTEPA KSRDHTERML KAMGAQIQSD GTTVRLVASR LSATTFHVPA DPSSAAFILA
AALIVPESKV TTSNICLNPT RIGFLNVLER MGANIEIHNE RESSGEPIGD IEASTSELNG
IEIGGTEIPT LIDEIPILAV LATQAKGRTV IRDAEELRIK ETDRISVLCR ALQQMGADIR
EMRDGFEIHG PCKLKGAKVD PDHDHRIAMA LAVASLIAED KTTILGAECA SISYPNFWDH
LSSLGVELSG TQSDSKTNV
|
|---|
| |