Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tter_0027 |
Symbol | |
ID | 8644483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobaculum terrenum ATCC BAA-798 |
Kingdom | Bacteria |
Replicon accession | NC_013525 |
Strand | - |
Start bp | 27108 |
End bp | 29180 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
Protein accession | YP_003321772 |
Protein GI | 269925149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAAA GTCAGGAAGT TACTAGCAAC AGGTATTGCG TAGACCCTTA CTCCTACAAG AGGCGGTGTA CTCATGAGGT AATGGTTGGT AATGTGGGAG TTGGGGGAAA TAATCCAATA AGAGTTCAGT CGATGACCAC AACCAGGACA AAGGATGTGG AATCGACTGT TAATCAGATC GTGTCCTTGG CGAGAGTGGG CTGCGAGATA GTGAGAGTTA CTACTCCCAC GCCTGCTGAT GCCAGGGCCA TAAAGGATAT CAAGAAGGAG CTTCAGTCCA AGAATATACA CATTCCTATA GTGGCTGATG TTCATTTCAG TCCTCATGCA GCGATGGAGG CTGCGCTATG GGCGGACAAA GTAAGGATCA ACCCGGGTAA TTTTGCGGAC ACTAAGCTCT TTCACATAAA AGAGTACACC GATGAGGAGT ATGCTAAGCA TCTGGAGAAG ATAGCTGAGA AGCTATATCC TCTGGTGATG CGTTGTAAGG AGAGGGGAAT ATCGATGCGC ATTGGCACTA ATCATGGTTC CCTCTCCGAC AGGATAATGT CCAGGTATGG TGATACCCCG CTGGGCATGG TGGAGTCCGC CCTCGAGTTT GTGCGTATGT GTGAAGAGTG GGGATACAAG GACATAATAC TTTCTATGAA AGCCTCTAAT CCAAAGGTAA TGATAGCTGC CTATAGGCTT CTCGCTGCCA GGATGCTCGA GTACGGCATG ACTTATCCCT TCCACTTGGG TGTCACAGAG GCTGGCAATG GTGAAGATGG ACGCATCAAG TCAGCTATTG GTATAGGTAC TTTGCTTGAG GATGGGATAG GTGACACTGT AAGGGTTTCC CTTACTGAAG ACCCTGAAAA CGAGATCCCA TTCGCCTACG AACTAGTCAA GCGATATGCT TATGGTATAG TCCCAGACAG TGATGAAGCC ACATCTATAG ATCCTCTGCC GGATCTTAGG TCACCTTTTG ACTATTCTCC AAGACCGACC AGGAAAATAT TCCTGGGAGA GCACGTGCTT GGAGCTAATA ATCCTCCTCT AGTGCTCTAC AAGCAGTCGT CTCCTCTATC AATTAACGGG GTAGTCAGCA TAAATAGGCC CGTTGGTCGC GATAGCCTGA GGGCAGATGC ATTGTCTCTG GAGGTGGTAT CTGAGAAGGA CAGGGACGTT TTTCAGACGT CAGCTAGTGG TTTACAGTTC GCATCCAACA AGCCAGCCTT GATCGCTACC CTTCGATTCC CTGTGGATGT GAGAGATATT GAAGCCGCGG CCTACATGTG TTCTATAGAA CGGGGACAAG AGGATAGGTT GTCTACGGTT GCACGGCTTG CCGTTGAGCA CAAGCGTCCG CTTGTTCTAG AACTTATCGC TAATATTGCC CATGATCAAG CGCGCGATCT TGAGGGTAAG CATGATTATT CTGTGGTTGA TGAGCTGATA AGTTATGCAC TGAAGGTCGA GCAGTTTGGG GTAAATGATC TTATCCTTGC CCTGAGAATA CCTGATAGAT CTTACCGTAT CAGGGCCTAT AGGCTACTAG ATTCGAGGCT AAGGGAGCTA GGGAAAGATT GGAACCTCCT TTTGACGGTC ACCGAAGATG ACCTGATAGA TGCCTCGATT GGCCTCGGTT CTCTATTGTG CGATGGTATA GGCTCTATGG TTTCTATAGA AGGCAATAAA CCCTATGAGG AAAAGATAAG CTTGGTGTTC AATATCCTCC AGGCTTCTGG TGCTAGGATC AGCAAGGCGG AGTTTATAGC CTGCCCTAGC TGTGGTAGAA CGCTCTTTGA TTTACAGACG ACCACCGAAA AGATCAAGAG TAAGACTGGT CATTTGAAAG GCGTCAAAAT AGCTGTGATG GGTTGTATCG TGAATGGCCT TGGGGAGCTG GCAGATGCTG ACTTCGGCTA TATGGGAAGC GGCGAGGGTA AAGTAAATCT ATTTGTGGGC AAGACCTGCG TTGAGAAGAA TGTGCCGGAA GAAATAGCTG CAGACAAACT GGTGGATTTG ATCAAGGCTC ATGGCAGGTG GATCGATCCT CCAGACAATA ACTCCTCTAT GCATGACTCC TAG
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Protein sequence | MVKSQEVTSN RYCVDPYSYK RRCTHEVMVG NVGVGGNNPI RVQSMTTTRT KDVESTVNQI VSLARVGCEI VRVTTPTPAD ARAIKDIKKE LQSKNIHIPI VADVHFSPHA AMEAALWADK VRINPGNFAD TKLFHIKEYT DEEYAKHLEK IAEKLYPLVM RCKERGISMR IGTNHGSLSD RIMSRYGDTP LGMVESALEF VRMCEEWGYK DIILSMKASN PKVMIAAYRL LAARMLEYGM TYPFHLGVTE AGNGEDGRIK SAIGIGTLLE DGIGDTVRVS LTEDPENEIP FAYELVKRYA YGIVPDSDEA TSIDPLPDLR SPFDYSPRPT RKIFLGEHVL GANNPPLVLY KQSSPLSING VVSINRPVGR DSLRADALSL EVVSEKDRDV FQTSASGLQF ASNKPALIAT LRFPVDVRDI EAAAYMCSIE RGQEDRLSTV ARLAVEHKRP LVLELIANIA HDQARDLEGK HDYSVVDELI SYALKVEQFG VNDLILALRI PDRSYRIRAY RLLDSRLREL GKDWNLLLTV TEDDLIDASI GLGSLLCDGI GSMVSIEGNK PYEEKISLVF NILQASGARI SKAEFIACPS CGRTLFDLQT TTEKIKSKTG HLKGVKIAVM GCIVNGLGEL ADADFGYMGS GEGKVNLFVG KTCVEKNVPE EIAADKLVDL IKAHGRWIDP PDNNSSMHDS
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