Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1722 |
Symbol | |
ID | 5170018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1718791 |
End bp | 1719672 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640564248 |
Product | ABC transporter related |
Protein accession | YP_001245303 |
Protein GI | 148270843 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGTGA TCGAAGTGAG AGATCTCACT AAATACTACG GAAAGTCCAG AGGAGTAGAA GGTGTAACTT TCTCAGTTGA AGAAGGAGAG ATATTCGGCT TCATCGGACC GAACGGTGCC GGGAAGACAA CCACCATAAG GCTTCTTCTT GGTTTGATCT TTCCGGATTC TGGTCTGGCA GAGGTTTTCG GAAGAGACGT TCTGAGAGAA GGAAAAGAAA TAAGAAAGAA CATCGGTTAC ATTCCAGGAG AGGTGAGCTT TTATCCGGAA GTGACGGTGG AGGAATTTCT CAGGTACTCT GCCAGTTTCT ACGAAAGGGT AGACTGGGAT CATGTGAAGG AGCTCTGTGG TGTTTTCTCG CTCGACATGA AAAAACGTAT CAAGGAACTC TCCATGGGAA ACAAAAAGAA AGTGGCTATC GTTCAGTCTT TGATGCACAG GCCAAAACTT CTTATCCTGG ATGAGCCCAC GAATGGACTC GATCCTATCG TTCAAAACAC CTTCTTTGAA ATTCTGAAAA AAGAGAAAGA AAAAGGAACG ACCGTGTTTT TCTCTTCTCA CATACTGAGC GAGGTGGAAA AGCTGTGTGA TCGTGTGGCG ATGATAAAGG ATGGAAGAAT CATCAGGGTA GAAAAGGTGG AGAATCTCAA AGGGGAAAGG TACAAGGTGG TCCGGGTCAA AGGAGAAAAT CTGGAAAAGC TGAAAGATCT GGCTGAAGTG AATCGACTGA AGTTTGAAAA CGGCACAGCA GAGTTCCTCT TCTCAGGAAG TGTTGAAAGA CTCATTGAAA TTCTTCGTAG CTTGAAACTG TCCGATTTCT GGGTGGAGGA ACCTTCTCTT GAAGAGATAT TCATGTCCTA CTATCGGGAG GGAGAAAAAT GA
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Protein sequence | MSVIEVRDLT KYYGKSRGVE GVTFSVEEGE IFGFIGPNGA GKTTTIRLLL GLIFPDSGLA EVFGRDVLRE GKEIRKNIGY IPGEVSFYPE VTVEEFLRYS ASFYERVDWD HVKELCGVFS LDMKKRIKEL SMGNKKKVAI VQSLMHRPKL LILDEPTNGL DPIVQNTFFE ILKKEKEKGT TVFFSSHILS EVEKLCDRVA MIKDGRIIRV EKVENLKGER YKVVRVKGEN LEKLKDLAEV NRLKFENGTA EFLFSGSVER LIEILRSLKL SDFWVEEPSL EEIFMSYYRE GEK
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