Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1699 |
Symbol | |
ID | 5171445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1699442 |
End bp | 1699987 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640564225 |
Product | helix-hairpin-helix repeat-containing competence protein ComEA |
Protein accession | YP_001245280 |
Protein GI | 148270820 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTCA AAAAGCAGCA TCAAAGAACA ATACTGTTCG TGGCACTCGT GTTCTTCATA TTGCTTGGAA TTGTTATGGA ACGAGAAACA AAAACAGAGG AGGACACAAC ACCCTCTCAG AAGGTTGTTG CTTTTCCGGT GGATCTGAAT ACCGCTTCTC TGGAAGATCT GATGTCGATT CCCGGAATCG GCCCTGTGAA GGCCCAGAGG ATCATCGATT ACAGAGAGTC ACATGGTGGG TTTTCGAGTG TGGAAGAATT GAAGAACGTC TCCGGGATCG GAGAGAAAAC TCTGGAGAAG ATTTCTGGAT ATGTGACCGT TGAGGGAGTT GAACAACATA TCAAAAGAGA AGTCACAAAA CTGAACGTAA ACACGGCTTC TGTTGAAGAA CTCGAAACCC TTCCCTACAT AGGTGAGATG AAGGCAAAAG CCATTGTCGA GTACCGTGAA AAAAACGGTC CTTTCTGTTC TCCCGAAGAT CTTCTGAACG TGCCTGGAAT AGGTGAAAAG ACACTGGAGA AAATAAGAGG AAAAATCACA TTTTGA
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Protein sequence | MKLKKQHQRT ILFVALVFFI LLGIVMERET KTEEDTTPSQ KVVAFPVDLN TASLEDLMSI PGIGPVKAQR IIDYRESHGG FSSVEELKNV SGIGEKTLEK ISGYVTVEGV EQHIKREVTK LNVNTASVEE LETLPYIGEM KAKAIVEYRE KNGPFCSPED LLNVPGIGEK TLEKIRGKIT F
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