Gene Tpet_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1685 
Symbol 
ID5170459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1684823 
End bp1685818 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content49% 
IMG OID640564211 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001245266 
Protein GI148270806 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0582444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTTC TTGAGGTGAA GAACCTGAAG ACCTACTTTT TTACAGACGA AGGCGTTGTG 
AAGGCGGTCG ATGGGGTGAG TTTTGAGATA GAGGAAGGAA AGACACTGGG TGTTGTCGGT 
GAGAGTGGCT GTGGAAAGAG TGTGACGGCA AGGTCGATCA TAAAGCTTCT TGGCACAACA 
GGAAGGATAG TCTCCGGAGA GATCCTCTAC AACATGGACG GGAAGGTGGT GGATCTTGCA 
AAGTTCTCAA AGGAAGAGAT CAGAAAGGTC AGAGGAAGGC ACATTGCGAT GATCTTTCAG 
GAGCCGATGG CCGCCTTCTC TCCTGTCTAC ACGGTGGGAG ACCAGATCAT AGAAGGTATG 
GTCTATCACT TCAAGATATC AAGGGAAGAG GCAAGAGAGC GTGCGATAGA ACTCTTAAGA 
AGAGTTGGTA TTCCAAAGCC GGAGAAGATG ATAGACGCCT ATCCGTTTGA GTACTCGGGT 
GGTATGAGGC AGCGTGCGAT GATAGCGATG GCTCTTTCGT GTAATCCGCG TCTTTTGATC 
GCAGACGAGC CGACCACGGC CCTCGATGTG ACGATACAGG CTCAGGTTCT TGATCTTTTG 
AGGGAGCTTC AAAAAGATTA CAACATGTCG ATCATGATGA TCACACACAA CATGGGAGTC 
GTTGCGGAGA TGTCTGATCA TGTTGTGGTG ATGTACCTTG GAAGGGTGGT GGAGAGTGCA 
CCCGTTGAGG AGCTCTTTTA CAATCCAAAG CATCCATACA CGTCGCTTCT TTTGAGGTCC 
ATTCCTGTTG TGGGAAAGAG GGTGGAAAGG CTCGAGGTGA TAGAAGGGGA TGTACCAGAT 
CCAAGGAACA TGCCAAAAGG TTGCAGGTTC CATCCAAGGT GCCCCTACAG GATGAAGGGT 
CTCTGTGATG AGAAAGAGCC GGTTGAGGTT GAGGTGGGGC CAAAACATAA AGTCAGTTGT 
TTTCTCTATG GAGGGACAGA AGATGGCGCT TCTTGA
 
Protein sequence
MALLEVKNLK TYFFTDEGVV KAVDGVSFEI EEGKTLGVVG ESGCGKSVTA RSIIKLLGTT 
GRIVSGEILY NMDGKVVDLA KFSKEEIRKV RGRHIAMIFQ EPMAAFSPVY TVGDQIIEGM 
VYHFKISREE ARERAIELLR RVGIPKPEKM IDAYPFEYSG GMRQRAMIAM ALSCNPRLLI 
ADEPTTALDV TIQAQVLDLL RELQKDYNMS IMMITHNMGV VAEMSDHVVV MYLGRVVESA 
PVEELFYNPK HPYTSLLLRS IPVVGKRVER LEVIEGDVPD PRNMPKGCRF HPRCPYRMKG 
LCDEKEPVEV EVGPKHKVSC FLYGGTEDGA S