| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1681 |
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| Symbol | |
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| ID | 5170104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1679093 |
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| End bp | 1679896 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640564207 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001245262 |
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| Protein GI | 148270802 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000705466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAGAA AATTGTTCGT CATAATATTG TCAATTTTCT TCATGCTTCC AATCTTCTGG
TCAATTACTT CTTCGTTTAA AGGAATAGGA GAAATTTTTT CTTACCCACC AACGTTTTTT
CCGAAAAATC CTACCTTTGA GGGATACATA AAAGTGTTGA AAGAACATGA TTTCTTACTT
TATCTCAGAA ACACTCTTTT CGTAGCGGTT GTGGCAACAC TTTTGACAGT TCCTGTGTGT
TTGATGACCG GATACAGTTT GGCAAAAGGG ACTTTTAGAA GCAGAAAATT TTTCAACGGT
CTCTTTGCGT GGACTCTGTT CATAACAGCA GAAGTCACAA TGGTTCCGCT CTTTATAGTT
ATCAGAGGTT TGGGTCTGGT GAATTCCATA TGGGGTATGA TCATACCAGC TGTATACACC
CCCACAGGTA CATTTGCTGC AGTCCAGTAT ATGAGAGATA TTCCCAATGA GCTCCTTGAG
AGCGCAAAGA TAGATGGTGC AAACGAATGG CAGATTTTCT GGAGAATCGT TGTACCGCTT
TCAAAACCAC TGATGGCCAC CCTTTCTATA TTCTCCTTCA CCTGGAGATG GAATGATTTT
GTACTACCTC TCATCATTGT GAATAAGAAG AGTCTTTTCA CCTTGCAACT AGCTCTTGCC
TCCATTCAAG AAGAGCTGGG GCCGTACGAT TGGACCGCTG TGCTCGCTTT TTCGAACCTT
ACCGTGATTC CAACTCTCAT AATATTCCTG CTGTTCCAGA GATGGTTTAT GAGGGGTATC
ATGACTGGTG GATTGAAATA TTGA
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| Protein sequence | MGRKLFVIIL SIFFMLPIFW SITSSFKGIG EIFSYPPTFF PKNPTFEGYI KVLKEHDFLL
YLRNTLFVAV VATLLTVPVC LMTGYSLAKG TFRSRKFFNG LFAWTLFITA EVTMVPLFIV
IRGLGLVNSI WGMIIPAVYT PTGTFAAVQY MRDIPNELLE SAKIDGANEW QIFWRIVVPL
SKPLMATLSI FSFTWRWNDF VLPLIIVNKK SLFTLQLALA SIQEELGPYD WTAVLAFSNL
TVIPTLIIFL LFQRWFMRGI MTGGLKY
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