| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1653 |
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| Symbol | hisS |
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| ID | 5171392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1648727 |
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| End bp | 1649989 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564179 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001245234 |
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| Protein GI | 148270774 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.52822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATTACA AGAGGATAAA AGGAACAAAT GATATCTTCG GTGAAGAGAT ATGGTACTGG
AGATACGTTG AGGAAACCTT CAGAAACGTA TGTGAAAGCG CAGGAATAGA GGAGATCAGA
ACTCCCATAT TCGAACAGAC GGAGCTTTTC GTTAGAAGTG TGGGGGAAGA ATCAGACATC
GTTCAAAAAG AGATGTACAC CTTCCAGGAC AAAGCGGGAA GGAGCATCAC TCTGAGACCA
GAGGGTACTG CACCTGTCGT CAGGGCTTTT CTGGAAAATT CTCTGATAGA TAGGGGTTTT
CAGCAGAGAT ATTACTACAT AGGTCCCATG TTTCGATACG AAAAACCACA ATCGGGGAGA
TTGAGGCAGT TCCACCAGGT AGGTTTTGAG ATCATCGGAT CCGAATCTCC AAAAGCGGAT
TTCGAGGTGA TCATGCTGGT CGATACCTTC TTGAGAAAGC TCGGACTCAC GAAATACAGG
ATTCACTTGA ACTCCATAGG CTGTTCGGCG TGTAGAAAAA ACTATCGCGA AGCTCTCAAG
GAGTATTACG GTCAAATCCT GGCTAATCTC TGTGACGACT GCAAAAGACG TTACGAGACG
AACATTTTGA GACTGCTCGA TTGCAAGGTG GACCACGAAT ACGCTCTGAA TGCACCGAAG
AGCGTCGACT ATCTCTGTGA TTCCTGTAAG ACACATTATG AGAAGTTGAA AGAATACCTC
AACACTTTCG AGATCGAATA CGTAGAAGAT CACACTCTGG TTCGCGGGCT CGACTACTAC
ACCAGAACGG TCTTTGAGGT GAGACACGAA GGTCTGGGAG CCCAGAACAC CATCGCGGGT
GGCGGAAGGT ACGATGGCCT TTTCGTGGAG CTCGGAGGTT CTTCTGTACC CGCTCTTGGT
TTTGCAGGTG GTATAGAGAG AATAATACTC GCTCTGAAAG CAGAGGAGAT AGAAATCCCG
ATAAAAAACG TTCATCTTGT TTATGTCGTA ACTCTTGGTG AAAAGGCCTT TGCGGATGGC
GTTCAGCTCG CGGTTGAATT GAGAAAGAAA GGCTTGAGTG TGGATGTGGA CATCATGGAT
AGAAAACTTT CCGGTCAGCT TAAACACGCC CACAGAATGG GATCGAGGTA CGCGGTTATT
ATTGGTGATG AGGAACTGGA GAAAGGAATC GTAATTCTCC GCGACCTCGA AACAGGAGAC
CAGGTTGAAG TCGATCGAGA TTTCGCCGTC GATTACATCG CTGAAAGAGT CTCAAAAGAT
TGA
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| Protein sequence | MNYKRIKGTN DIFGEEIWYW RYVEETFRNV CESAGIEEIR TPIFEQTELF VRSVGEESDI
VQKEMYTFQD KAGRSITLRP EGTAPVVRAF LENSLIDRGF QQRYYYIGPM FRYEKPQSGR
LRQFHQVGFE IIGSESPKAD FEVIMLVDTF LRKLGLTKYR IHLNSIGCSA CRKNYREALK
EYYGQILANL CDDCKRRYET NILRLLDCKV DHEYALNAPK SVDYLCDSCK THYEKLKEYL
NTFEIEYVED HTLVRGLDYY TRTVFEVRHE GLGAQNTIAG GGRYDGLFVE LGGSSVPALG
FAGGIERIIL ALKAEEIEIP IKNVHLVYVV TLGEKAFADG VQLAVELRKK GLSVDVDIMD
RKLSGQLKHA HRMGSRYAVI IGDEELEKGI VILRDLETGD QVEVDRDFAV DYIAERVSKD
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