| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1626 |
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| Symbol | |
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| ID | 5170191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1625902 |
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| End bp | 1627065 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640564152 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001245208 |
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| Protein GI | 148270748 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC TCAGTTTCGT TTTATTCGTA TTGATAGCGG TGGTGGTGAT AACGCAGGAG
GAACCTCTTG TGAGCAACAT ATTCCAGGAT ACATACATTC TGGATGCCCT CTCAGACATC
TCCGCACAGA CAGGAATTCC AATCATAGCG GACACTACTG TGACTGGCTT CATCACTATG
GAGCTCAACG AAGTACCCTT AGAGCAGGCA CTGAAGATGA TCCTCATGCC TGGAGGGTAT
GTTTTCAAAA AGATGGACGG GTTTTACTTC GTGGGATCAC CAGATCCAGC GAATCCCGCC
TTCAGATACC TTGCAGTTAC AGGGACCTAC AAGTTGAAAT ACATAACCAC AGCCGATGCC
CAGGAACTCT TGCCAGCAGT TTACAGGAAT TACGTCAGGT TCAACGAGAA GAACAACATG
ATAACCATCA CAGCACCTGA AGAGATCATA CGGGAATTCG AGGAAGATCT CAAAAAGATA
GACATCCCGA TACCACAGGT GAAGATCAGT GTGATCGTCA CAGAAATTTC CAGAGATTAT
TCGAATGAAC TGGGATTGAA CAGTTTAGAT TATTCCTTCG GTTCCGGGCA GGAATTCAAC
GAGAACTGGA CGGCTACTCT CGGTTTGGTA ACAGGAATCC TCAATGTTCA GACAGACGTT
TTTGGCCAAA TTCTGGCAAA ATTAAAACTC CTCGAGGAAG ATCAGAAAGC GAAGATCACA
GCCGATCCCT GGATCATCGT GAAGAGTGGA GAAAAGGCCT CTCTTTTCTT AGGGGAAAGA
CAGGTTGTTC TCCTCGAGGC CGAAGGAGCG GTGAGCAGAA TCGAGTCCAT AGACGTTGGA
GTGAGCATCG AGATTCAACC GCGTGTGATG GACAAAGAAG AACTCGAGCT TACACTCTCA
CCAAAAGTCA GTCACTTCGC AGGAGAGAAA CTCGGAACAT TCGCTGTAAA ACAGAACGAA
CTCTCTACAA CACTTTTCCT GAAAAATGGT CAGACCGTTG TGATCTCCGG TGCCACCATC
GAAGACAGCG CCCAGACCGG CTCCGGTGTG CCCATATTGA ACAAGATCCC ACTCATACGA
TACCTCTTCG GTGGTACAAC GAAAAAAGAT TCCCAAAAAG AACTCTACAT ATTCATCAAG
GCGGAAATCC AGGGAAGTGA GTGA
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| Protein sequence | MRKLSFVLFV LIAVVVITQE EPLVSNIFQD TYILDALSDI SAQTGIPIIA DTTVTGFITM
ELNEVPLEQA LKMILMPGGY VFKKMDGFYF VGSPDPANPA FRYLAVTGTY KLKYITTADA
QELLPAVYRN YVRFNEKNNM ITITAPEEII REFEEDLKKI DIPIPQVKIS VIVTEISRDY
SNELGLNSLD YSFGSGQEFN ENWTATLGLV TGILNVQTDV FGQILAKLKL LEEDQKAKIT
ADPWIIVKSG EKASLFLGER QVVLLEAEGA VSRIESIDVG VSIEIQPRVM DKEELELTLS
PKVSHFAGEK LGTFAVKQNE LSTTLFLKNG QTVVISGATI EDSAQTGSGV PILNKIPLIR
YLFGGTTKKD SQKELYIFIK AEIQGSE
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