| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1610 |
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| Symbol | |
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| ID | 5170830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1610336 |
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| End bp | 1611448 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640564136 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001245192 |
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| Protein GI | 148270732 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000136446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAGG TGCTGGTAAC TGTTCTTCTT GTTTTGACAG TTTTGAATCT TTTTTCTGCC
GTTAAAATCG GTGTGATCCT TCCAATGACG GGTGGTATTT CCGCTTTTGG AAGGATGGTG
TGGGAAGGGA TTCAGATCGC GTACGAAGAG AAACCCACAG TTCTGGGAGA AAAAGTGGAG
CTCCTTCTTC TCGACACCAG AAGTGAAAAA ACCGAAGCAG CGAACGCAGC GTCAAGAGCC
ATCGACAAAG AGAAGGTCCT CGCAATAATT GGTGAAGTGG CAAGTGCGCA TTCTCTCGCC
GTAGCACCCA TTGCAGAAGA AAACAAAGTT CCCATGATAA CTCCCGCTTC CACGAATCCA
CTCGTGACGC AGGGAAGAAA GTTCGTCTCC AGAGTTTGTT TCATCGACCC ATTCCAGGGA
GTAGCCATGG CAGTTTTTGC GTATAAAAAT CTGGGCGCAA AAAGGGTTGT TGTGTTCACG
GACGTTGAAC AGGACTACAG CGTCGGACTC TCTAATTTCT TCAAAGACAA GTTCACCGAA
CTCGGCGGAC AGGTGAAAAG GGTGTTCTTC AGGAGCGGAG ATCAGGACTT TTCCGCACAG
CTTTCCGTTG CGATGTCGTT CAACCCGGAT GCAATCTACA TAACAGGGTA CTACCCGGAG
ATCGCCCTCA TCTCCAGACA GGCAAGGCAG CTTGGATTCA CCGGTTACAT CCTCGCTGGT
GACGGCGCAG ACGCACCGGA GCTCATAGAG ATCGGTGGAG AAGCAGTGGA AGGTCTTCTC
TTCACCACAC ACTACCATCC GAAGGCAGCC AGCAACCCTG TTGCAAAGAA GTTCGTAGAA
GTCTACAAGG AAAAATACGG AAAAGAACCT GCTGCACTTA GTGCCCTCGG ATACGACGCT
TACATGGTGC TTCTCGACGC GATCGAAAGG GCAGGAGGCT TCGACACGGA AAAGATCGCC
GAGGAGATCA GAAAAACGGA AGATTTCAAC GGTGCCAGCG GTATCATAAA CATCGACGAG
AACGGAGACG CTATCAAGTC TGTCGTTGTA AACGTCGTGA AGAACGGTTC CGTTGACTTT
GAAGCCGTCA TCAATCCTGG CGACCTCAAA TAA
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| Protein sequence | MRKVLVTVLL VLTVLNLFSA VKIGVILPMT GGISAFGRMV WEGIQIAYEE KPTVLGEKVE
LLLLDTRSEK TEAANAASRA IDKEKVLAII GEVASAHSLA VAPIAEENKV PMITPASTNP
LVTQGRKFVS RVCFIDPFQG VAMAVFAYKN LGAKRVVVFT DVEQDYSVGL SNFFKDKFTE
LGGQVKRVFF RSGDQDFSAQ LSVAMSFNPD AIYITGYYPE IALISRQARQ LGFTGYILAG
DGADAPELIE IGGEAVEGLL FTTHYHPKAA SNPVAKKFVE VYKEKYGKEP AALSALGYDA
YMVLLDAIER AGGFDTEKIA EEIRKTEDFN GASGIINIDE NGDAIKSVVV NVVKNGSVDF
EAVINPGDLK
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