| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1600 |
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| Symbol | |
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| ID | 5171444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1600711 |
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| End bp | 1602216 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640564126 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001245182 |
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| Protein GI | 148270722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TAGTCTGGTT GTTTTTGATC CTGACAGTAA CGCTCTCCTT CGCGGCAAAA
GACATCATCG TGGTGGGTAC AACGGACAAA ATCAGAACTC TCGATCCTGC CAACTGTTAC
GATTACTTTT CTTCCAACAT CCTTCAAAAC GTCATGGTTG GATTGGTTGA TTACGAAATA
GGAACAAGCG TTCTCAAACC CGTTCTGGCG GAGAGATGGG AAGTCGATGA AACAGGAACG
GTTTACACGT TCTATCTGAG AAAGGATGCA AAGTTCGAGG ATGGAACACC CATCGATGCT
CACGTCTTTA AGTACTCTTT CGACAGAGTG ATGAAACTGA ATGGAGATCC GGCATTCTTA
CTCTCTGATG TCGTCGAAAA AACAGAAGTA GTGGATGACT ACACCTTCCG TGTAACTCTG
AAGTACCCAT TCTCCGCGTT CGTCTCTGTC CTCGGTTACA CCGTTGCGTA TCCGGTGAAC
CCGAAGGTCT ATCCAGTCGA TTCCTTCTAC GAAGGTATCC CGTCTGCATC CGGCCCCTAC
AGGGTCAAAG AATGGATCAG AGATGTGAGA ATCGTTCTCG AAGCGAATCC GAACTACTTT
GGTGAAAAGC CAAAGACAAA GACCATCGTG ATCAATTTCT ACGAGAACGC TTCCACACTC
AGATTGGCAC TCGAGACGGG AGAAATCGAT GTTGCTTACA GACATCTCGA CCCCAGAGAT
GTTATCGATC TCGAGGGAAG AGAAGACATC GTCGTTTACA AAGGTAACAG TCCACAGATC
AGATATCTGG TGATCAACGT CACACAGCCC CCGTTCGACA ACGTGAAGGT GAGGCAGGCA
CTAGCTTATG CGGTGAACAG AGACGTCATA GTTGAAGACG TGTTCGTGGG GCTTGCAAAA
CCGTTGTACT CGATGATCCC GGAAGGCATG TGGGGACACA AGGACGTATT CCCGAAGAGG
GAGCTCGAAA AAGCGAAAGC TCTTCTCAAA GAAGCAGGCT ATGACGAGAA AAATCCTTTT
GTGATAGACC TGTGGTACAC ACCTTCACAC TACGGAACGA CAGAAGCGGA TGTTGCCCAG
GTGTTGAAGG AATCGTTCGA AGAAACGGGT GTCATAAAAG TGAATCTCAA GTACGCAGAG
TGGTCCACTT ACGTGGAGTA CTTCCTGAAC GGAACGATGG GTTTCTTCCT CCTCGGATGG
TACCCCGATT ACCTTGATCC GGACGATTAC GTGTGGCCGT TCCTCAGTGA AAGCGGTGCA
AAATCCCTCG GTAGCTTCTA CTCGAATCCT GAGGTAGAAA ACCTGATGAT AGAAGCAAGG
AAATTCACTG ATCTGGAAAA GAGAACAGAA ATCTACTACA AAGTCCAAGA GATCCTTGCA
AGGGATGTTC CTTACATACC GCTCTGGCAG GGAGTTGCAA CCTGTGCAGC GAAAAAACAG
GTGAAAGGAA TTCTGCTTGA ACCCACACAG ATATTCAGAT ACTACATACT CTACTGGGAA
GATTGA
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| Protein sequence | MKKLVWLFLI LTVTLSFAAK DIIVVGTTDK IRTLDPANCY DYFSSNILQN VMVGLVDYEI
GTSVLKPVLA ERWEVDETGT VYTFYLRKDA KFEDGTPIDA HVFKYSFDRV MKLNGDPAFL
LSDVVEKTEV VDDYTFRVTL KYPFSAFVSV LGYTVAYPVN PKVYPVDSFY EGIPSASGPY
RVKEWIRDVR IVLEANPNYF GEKPKTKTIV INFYENASTL RLALETGEID VAYRHLDPRD
VIDLEGREDI VVYKGNSPQI RYLVINVTQP PFDNVKVRQA LAYAVNRDVI VEDVFVGLAK
PLYSMIPEGM WGHKDVFPKR ELEKAKALLK EAGYDEKNPF VIDLWYTPSH YGTTEADVAQ
VLKESFEETG VIKVNLKYAE WSTYVEYFLN GTMGFFLLGW YPDYLDPDDY VWPFLSESGA
KSLGSFYSNP EVENLMIEAR KFTDLEKRTE IYYKVQEILA RDVPYIPLWQ GVATCAAKKQ
VKGILLEPTQ IFRYYILYWE D
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