| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1537 |
|---|
| Symbol | |
|---|
| ID | 5170302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1525241 |
|---|
| End bp | 1526308 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640564064 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001245121 |
|---|
| Protein GI | 148270661 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0442847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGCAGG TAAGAATAGA CGGAGTGAAG AAATATTTCG GGAATGTGAA AGCCCTCGAT
GGAATCGACC TTGTTGTGAA CGAAGGGGAG TTCCTGGTTC TTCTCGGTCC ATCCGGCTGT
GGAAAGACGA CCCTTCTGAG GTGTATAGCG GGCCTCGAGC AGGTGACCGG GGGAAGGATC
TTCTTCAACG ATCGCGATGT GACGAACCTT CCTCCGAAGG ACAGGAACAT TTCGATGGTC
TTCCAGAGCT ACGCGGTGTG GCCCCACATG AAGGTGTACG ACAACATCGC GTATCCTCTG
AAACTGAAAA AAGTCCCGAA AGAGGAGATA GAAAAGAGGG TAAAGTGGGC AGCGGATCTC
CTTCACATCT CCGAACTCCT CGACAGATAT CCCGCGCAGC TCTCCGGAGG TCAGAGGCAG
AGGGTTGCCG TTGCCCGCGC GATCGTTCAC GAACCCGAAG TGCTCTTGAT GGACGAGCCT
CTTTCTAATC TGGACGCGCT TTTGAGGGTG AAGATGAGAA GCGAGCTGAA AAAGCTCCAG
GAAAGAATAG GAGTCACCAC CATCTATGTG ACTCATGACC AGACAGAGGC CATGACGATG
GGAGACAGAA TCGCGGTGAT GAACCAGGGG AGAATCCAGC AGGTTGGTAC GCCCTCTGAG
ATCTATCACC ACCCGGTGAA CATCTTCGTT GCTGGTTTTG TGGGGTCTCC GCAGATGAAC
TTCTTAGAGA TGGAAGTGAG ATCGGAAGGA AATAGCGTTG TCCTCCAAAA CGGTGAGATA
AAGATTCCCG CGAAGACCGA TCCAGGTGCA AAAAAGGTGA TCCTTGGTAT TCGACCGGAG
AACGTCTATC TGGAGGAAAA GCCGAACACT TTGAAGCTGG AAGGAGAGGT TTATTTCGCC
GAGAAACTCA TGTCGGATAC GATTCTCCAT CTCAACGTTG GAAGTGAGAA GATCGTCGCA
AAAATTCCAG GGGATGTGGA TTTCAGAAGC GGTGAGAAGA TCACGTTTTT CCTGGACGTT
GAAAAGATCC ATCTCTTTCA CCCTGAGACG GGAGAGAGAA TCTCATGA
|
|---|
| Protein sequence | MAQVRIDGVK KYFGNVKALD GIDLVVNEGE FLVLLGPSGC GKTTLLRCIA GLEQVTGGRI
FFNDRDVTNL PPKDRNISMV FQSYAVWPHM KVYDNIAYPL KLKKVPKEEI EKRVKWAADL
LHISELLDRY PAQLSGGQRQ RVAVARAIVH EPEVLLMDEP LSNLDALLRV KMRSELKKLQ
ERIGVTTIYV THDQTEAMTM GDRIAVMNQG RIQQVGTPSE IYHHPVNIFV AGFVGSPQMN
FLEMEVRSEG NSVVLQNGEI KIPAKTDPGA KKVILGIRPE NVYLEEKPNT LKLEGEVYFA
EKLMSDTILH LNVGSEKIVA KIPGDVDFRS GEKITFFLDV EKIHLFHPET GERIS
|
|---|
| |