Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1530 |
Symbol | |
ID | 5170748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1517663 |
End bp | 1518736 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640564057 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_001245114 |
Protein GI | 148270654 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0330741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGAATAG TAGGTCTTCC CAACGCGGGG AAATCTTCCT TTTTCAACTT CCTGACCGAC AACAGCGTAC CTGCGGAAAG TTTTCCTTTT TGCACGATTG AACCGAACGT GGGGATTTTC GTTGTGCCGG ATGAAAGGAT AGAGCTCCTC GCGAAGAACG AAGGATCGAA AAAGGTGGTT CATCCTTTCG TGGAGGTTGT GGACATAGCG GGACTCGTCA AGGGAGCCAG CAAAGGAGAA GGACTTGGAA ATCAGTTCCT TGACCACATA AGCAAGGTGG ATGTTATAGC CCATGTCGTC CGTCTTTTTG AAGACGGAAG AGTTTCTCAT CCGTATCAGA ACGTGGATCC AAAAAGAGAC ATAGAAATAG TCGAAACCGA GCTCATACTC AAGGATCTCG AAACTGTTCA AAAGCGTCTC GAAAAGCGGA TGAAAGTTGC AAGAACGGGA GACAAGGAAG CAAAGAGAGA GGTAGAACTC CTCCAGAATC TTCGGGAGTT TCTCTCTCAG GGTAAAAAGG CCTCGAAATT TCCAAGGCAC GACAGATTCG AGGAAGAGGT GATCGAATCC CTCTTCCTCC TCACAGATAA ACCTCAGATA CTGGTTTTCA ACGTCGATGA ATTGGACGAA GAAAAAAGAA AACTGATAGA AGAAATCGTC AAAGAAAAGG ACGAGGAATA CATTATAATA AACGTGAAGC TCGAAGAAGA ATTGAAATTT CTCCCGGAAG AAGAGGCGGA AGTTTTCAGG AGAGAGTACA ACCTTTTCGG TGACAAAAGG AGGGAGTTTT TCGAGAAGGT TTTGAAACTT CTGAACCTTA TAAGATTTTT GACAGCGACG CAGAATGAGG CGAGAAGCTG GACTATAAAG AAAGGATCCA CTGCCTATGA AGCGGCGGGT TTGATTCATT CAGATATACA GAAAGGGTTC ATAAAGGCCG AAGTTATTCC TTTCGAAAGA TACGTGGAAT TTGGTTCTCT GAAAAAAGCA CGTGAAGCCG GAGCTGTGGA AACACATGGA AAAGATTACA TTGTAAGAGA GGGGGATGTG ATCCATTTCC TATTCCGTGC TTGA
|
Protein sequence | MGIVGLPNAG KSSFFNFLTD NSVPAESFPF CTIEPNVGIF VVPDERIELL AKNEGSKKVV HPFVEVVDIA GLVKGASKGE GLGNQFLDHI SKVDVIAHVV RLFEDGRVSH PYQNVDPKRD IEIVETELIL KDLETVQKRL EKRMKVARTG DKEAKREVEL LQNLREFLSQ GKKASKFPRH DRFEEEVIES LFLLTDKPQI LVFNVDELDE EKRKLIEEIV KEKDEEYIII NVKLEEELKF LPEEEAEVFR REYNLFGDKR REFFEKVLKL LNLIRFLTAT QNEARSWTIK KGSTAYEAAG LIHSDIQKGF IKAEVIPFER YVEFGSLKKA REAGAVETHG KDYIVREGDV IHFLFRA
|
| |