| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1516 |
|---|
| Symbol | |
|---|
| ID | 5170915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1504034 |
|---|
| End bp | 1505167 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640564042 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_001245100 |
|---|
| Protein GI | 148270640 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCCA GGAGAATATC AGAGATTCCC ATATCGAAAA CCATGGAACT CGACGCGAAG
GCCAAAGCCC TCATAAAAAA GGGAGAAGAC GTGATCAATC TAACGGCTGG TGAGCCGGAT
TTTCCCACAC CGGAACCCGT CGTGGAAGAA GCGATGAGAT TTCTCCAGAA AGGAGAAGTG
AAATACACAG ATCCTCGTGG TATCTACGAA CTCAGAGAGG GTATAGCGAA AAGGATAGGC
GAGAGATACA AAAAAGATAT CTCACCGGAT CAGGTCGTGG TGACGAATGG AGCGAAACAG
GCTCTGTTCA ATGCTTTCAT GGCCCTTCTT GATCCCGGTG ACGAAGTGAT CGTGTTTTCT
CCCGTCTGGG TCAGCTACAT TCCTCAGATC ATCCTTGCTG GTGGCACGGT GAACGTGGTT
GAGACGTTCA TGAGTAAAAA TTTCCAGCCC AGTCTGGAAG AGGTGGAAGG GCTTCTTGTT
GGGAAAACGA AAGCCGTTCT TATCAACTCT CCGAACAATC CCACTGGTGT GGTGTACAGA
AGAGAGTTCC TTGAAGGACT TGTGAGACTT GCCAAGAAGA GGAATTTCTA CATAATCAGC
GACGAAGTCT ACGATTCCCT TGTTTACACG GATGAATTCA CATCGATACT CGATGTTTCT
GAAGGATTCG ACCGGATAGT TTACATAAAC GGCTTCTCGA AGTCTCACTC CATGACCGGC
TGGAGGGTGG GTTACCTGAT ATCGAGCGAA AAAGTAGCGA CCGCTGTGTC GAAGATCCAG
TCTCACACCA CCTCCTGTAT CAACACGGTA GCACAGTACG CCGCCTTGAA GGCTCTGGAA
GTGGACAACT CTTACATGGT TCAGACCTTT AAAGAAAGAA AAAATTTCGT GGTGGAAAGA
TTGAAAAAGA TGGGTGTTAA GTTCGTGGAA CCAGAAGGTG CGTTCTACCT CTTTTTCAAA
GTCCGGGGTG ACGATGTGAA ATTCTGTGAA AGGCTCCTCG AAGAAAAGAA GGTTGCACTC
GTTCCAGGAT CCGCCTTTCT GAAGCCTGGA TTTGTGAGGC TTTCTTTTGC CACATCTATA
GAAAGACTTA CGGAGGCGCT GGATAGAATT GAAGACTTCC TCAATTCTCG TTGA
|
|---|
| Protein sequence | MVSRRISEIP ISKTMELDAK AKALIKKGED VINLTAGEPD FPTPEPVVEE AMRFLQKGEV
KYTDPRGIYE LREGIAKRIG ERYKKDISPD QVVVTNGAKQ ALFNAFMALL DPGDEVIVFS
PVWVSYIPQI ILAGGTVNVV ETFMSKNFQP SLEEVEGLLV GKTKAVLINS PNNPTGVVYR
REFLEGLVRL AKKRNFYIIS DEVYDSLVYT DEFTSILDVS EGFDRIVYIN GFSKSHSMTG
WRVGYLISSE KVATAVSKIQ SHTTSCINTV AQYAALKALE VDNSYMVQTF KERKNFVVER
LKKMGVKFVE PEGAFYLFFK VRGDDVKFCE RLLEEKKVAL VPGSAFLKPG FVRLSFATSI
ERLTEALDRI EDFLNSR
|
|---|
| |