Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1466 |
Symbol | |
ID | 5170218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1455444 |
End bp | 1457162 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563995 |
Product | ABC transporter related |
Protein accession | YP_001245053 |
Protein GI | 148270593 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTCT TCTTATTTAC AGGTCATCTC AGAGACGATA TCAGAAAATT CGAGAGGAAG TACAAAAAAC ACTATCCGAT TTTCTTCTTA CTGGAAGGCC TGTTTTTGAC CACCAACGTT CTTACTCCAC TTCTCATCAA AAAGACCATC GACAGTGCGT TTTACAGAGG TGATGTGGGA GAAATCGCTC TGTTCTCAGT ACTATACTTC ATCGTTCTTG TGGCCCAGTC TTTCATCATG TACAAACTCA ACTACTCAGC TGCGAAGTAC TTGCTGAACG CATCCCGGGC TAGGGAATCG AAGAGCGCAT ACGCAAAAAT CCTGGCGCTT CCACTGACTT ACGCGAACTC ACAGAACACC GGTGATTATC TTTCGGTTTT CATGAGGGAT GTTCCGAAGG TAGCTTCGGG AGTTTACCTT GGAAGGTTGC AGTTTTTCTT CAACCTGGGA TTTTTCCTTG CTGTTCTTTT CCTTTTGTTC ATTCTGAGTG TAAAACTCAC TCTTGTGGTC CTGGTGAGCA TCGTTCTGTT TTTTGTGTCA ACCTCGATTC TGAGGAAGAT GGTCATCAGG GCTTCTCAGA GAGATCAGGA ATCCTACCAG AGGTTTTTGA AAAGATCCAG GGAAGTGGTG GAAGGAATTC CTGTTCTCAA ACAGTTTTCT GGATCTTCGT TTCTCAAAAA CTTCCTCGAT TCAAGTGCCG GAGAATGGAG CAGGGCGAGT ATCGCTCACA GTACGGCAAA TGAACTGTCG AACAGAAACA TCGACATTAA CAGATGGATC GGGAGTACCA TCGTTCTTGC CTTCGGTATT TATCTTCTCT GGAAGGGTGA GATAAGTGTC GGAACACTTC TGGCCTTCGA ATCTTACATG AACTGGATGT ACGACATCGT CAGAATGGCG CTCACAGGCC TGACAATGTT CTTTTCGACG CTTCCAAACT GGGAAAACTT TGCGAGAATA TTTTCCATGC CCTTTGAAAG AGCAAGCGGT ATAAATCTTG AAAAGTTCGA AAAACTGCAA TTGAGGAATG TGTATTTTAA ATACGACGGA ACTCCTGTTC TCACTGGTTT GAATTTCGAG ATAAACTCCG GGGATAAGAT CGCAATTGTG GCAAGATCTG GGGCAGGAAA GAGCACGCTC GTTTCTCTTT TCAACAGGCT ACTGTCTCCC ACAGAGGGTG AAATTCTCAT AAACGGTGTT CCCATCGAAC AGTACTCTCT TCAATCACTC AGAAGAAACA TCGTTCTTGT TCGCTCGAAC GATATACTCT TTGATACAAC AATCAGAAAC AACATCACCC TTTTTGAAGA CTTTCCAGAA GATGAAATCG AAAATGTTCT CAAAATGTGT GAGTGTGACT TTGTTGAGAA ACTGGAAAGC GGAATAGACA CGATCGTAGG AGAGAGGGGA ACAAAACTCT CAGATGGTCA AAGGCAGAGA ATAGTCCTCG CGAGAGCTTT GATAAGAAAA CCACAGGTTC TCATCCTAGA CGAGGCCACC TCTGGTGTTG ATGGCAAGAC GGAGGAGAGG ATTTTCGAGA AAATCTTGAG GGAAATAGAA ACTGTGATTA TCATCTCACA CAGGCTTTCC ACTGTGAGAA AGGCCAAAAA GATATACGTC ATGGAGAACG GACGGATTCT GGACTCTGGT TCTCACGAGG AGCTGATCGT CAGGTGTGAA AAATACACAG AGATTCTAAA GGAGCAGTTT GTAGAATGA
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Protein sequence | MNLFLFTGHL RDDIRKFERK YKKHYPIFFL LEGLFLTTNV LTPLLIKKTI DSAFYRGDVG EIALFSVLYF IVLVAQSFIM YKLNYSAAKY LLNASRARES KSAYAKILAL PLTYANSQNT GDYLSVFMRD VPKVASGVYL GRLQFFFNLG FFLAVLFLLF ILSVKLTLVV LVSIVLFFVS TSILRKMVIR ASQRDQESYQ RFLKRSREVV EGIPVLKQFS GSSFLKNFLD SSAGEWSRAS IAHSTANELS NRNIDINRWI GSTIVLAFGI YLLWKGEISV GTLLAFESYM NWMYDIVRMA LTGLTMFFST LPNWENFARI FSMPFERASG INLEKFEKLQ LRNVYFKYDG TPVLTGLNFE INSGDKIAIV ARSGAGKSTL VSLFNRLLSP TEGEILINGV PIEQYSLQSL RRNIVLVRSN DILFDTTIRN NITLFEDFPE DEIENVLKMC ECDFVEKLES GIDTIVGERG TKLSDGQRQR IVLARALIRK PQVLILDEAT SGVDGKTEER IFEKILREIE TVIIISHRLS TVRKAKKIYV MENGRILDSG SHEELIVRCE KYTEILKEQF VE
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