Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1438 |
Symbol | |
ID | 5170628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1427224 |
End bp | 1429350 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563967 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001245027 |
Protein GI | 148270567 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000113293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAT GGCGACGTAA CATCCTTGGA AGAGAACTCG TAGTTCAGTA CGGAAAAGTA GCGAAACAAT CGAGTGGTTC AGCCCTGGTG AGGTTTGGTG ACACAGTTGT TCTGGCAACC GCAAACATTT CAGACAAAGC AGTGGAAGGA ATCGACTTTG TACCTCTCAC CGTTGAGTTC CAGGAAAGGT TCTACGCTGC CGGAAAGATC CCCGGTGGTT TCATAAAGAG GGAAGGTAAA CCCAGCGAAT CCGCTATTCT CTCAGCCCGC CTCATCGACA GACCGATAAG GCCTCTCTTT CCAAAAAAAC TCAGAAACGA GGTCCAGGTT ATCGTGACCG TGCTTTCGGT GGATCCGAAC GTTCCACCGG ACGTTGTGGG AATCTTTGCC GCGTCCCTCG CATTGAACGT TTCAAAGATA CCGTTTGAAG GTATAGTGGC GGGTATCAGG GTTGGTTACA GAGACGGACA GTTCATAGCC TTACCCAGTG AGGAAGACAT AGAAAAGGGC CTGATGGATA TCACCGTTGC TGGAACAAAA GACGCTGTCA CCATGGTCGA AGGTGAGGCG AAAGAAGTAG CAGAAGAAGA TATGGTGAAG GCCCTGAGAT TCGCGCATTC CGTTATAAAA GAACTCGTCG ATTTCCAGGA AGAGATTCTC TCAGAGTTCA ACGTGGAGAA AATCCCCGTT GTCGAGCCCA CACCACCTGA AGGCCTCGTT GAGGCTTTCA AAGATCTTCT AAACAAAGAA GAACTGGAAA GAAGAATCCT CGTAAAGGTG AAGAAGGAAA GAGAAGTGGC TCTCAAAGAG TACGAAGAAC AGCTTCTGAA TCAGATTGCA GAAAAATTGT CCGTAACCGA TTTGGAAGGA ATCAAACCCT TTGTCTCGGA ACTCTATGAA GATGCCGTCA AAAAAACAAT GAGGAGATTG ATAGTGGAGA AGGGTATCAG AGCGGACGGG AGAAAACCGA CCGAGATCAG ACCCATCTCC TGCGAGGTTG GATTGTTCCC GAGAACACAT GGCTCTGCTC TTTTCACCAG AGGGGAAACA CAGAGTCTCG GCATCGTTAC TCTCGGCGCT CCCATGGACG TTCAGATCAT AGACACACTC CTCGAAGAAG GCGTTAAGAG GTTCATGCTG CACTACAACT TTCCTCCGTT CTGTACAGGA GAGGTGAAGC CGCTCAGAGG TCCCAGCAGA AGGGAAATCG GGCATGGACA TCTGGCAGAA AGAGCTCTGA AGAACATGCT TCCACCCGAA GAAGAGTTCC CCTACACCAT AAGAGTGGTT TCTGAGATCC TGGAGTCCAA CGGTTCTTCC TCAATGGCCA CGGTGTGTTC AGGATCCCTG GCGCTGATGG ATGCTGGAGT TCCTATCAAG AAACACGTTG CAGGAATAGC GATGGGGCTC ATTCTTGAAG AAGACGCCGA GATCATACTC ACAGACATCA TTGGAATGGA AGACCACTAC GGTGATATGG ACTTCAAAGT GGCTGGAACA AGAGATGGAA TCACCGCCTT TCAGATGGAC TGTAAGGTCT CAGGTGTCTC AGATGAACTC CTCATGAAAG CGCTCATGCA GGCAAGGGAA GCGAGAATGT ACATTCTCGA CAGGATGTAT GAAACCATCT CTGCTCCAAG ACCGCATCTG TCCAAGTATG CACCGATCAT AAAGGTAACC AAGGTCGATC CAGAAAAAGT GGCGGATGTC ATAGGACCTG GAGGCAGAGT GATAAAGAAG ATCATAAAAG ACTTCGATGT GAAGGTGGAG ATCGACGACG AAACAGGCCT CGTCAAGGTC GTTGGAAGTT CTGAAGAAAA CGTTGACAAG GCCATCGAAC TCATAAGGGA AATAGCCAAA GAAATAGAAG TGGGAGAAGT TCTGGAAGGA AAGGTCACAA GGATAGAACC TTACGGACTG TTCATAGAGG TGAGACCAGG TAAGATAGGC CTCCTTCATC AGAGCAAAGT AGGAGAAGAT ATGAGGCAGT TCTTGAAAAA GGTGAAAGTC GGTGATACCA TAAAGGTACA GGTGATCAAC ATAGACGACC TCGGAAGACT GCAGTTCAAA CGTGTCACAG AGGGGGAAAA CACTCAGCAT GGAAAGACAC ACAGTAAACG AAATTGA
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Protein sequence | MKEWRRNILG RELVVQYGKV AKQSSGSALV RFGDTVVLAT ANISDKAVEG IDFVPLTVEF QERFYAAGKI PGGFIKREGK PSESAILSAR LIDRPIRPLF PKKLRNEVQV IVTVLSVDPN VPPDVVGIFA ASLALNVSKI PFEGIVAGIR VGYRDGQFIA LPSEEDIEKG LMDITVAGTK DAVTMVEGEA KEVAEEDMVK ALRFAHSVIK ELVDFQEEIL SEFNVEKIPV VEPTPPEGLV EAFKDLLNKE ELERRILVKV KKEREVALKE YEEQLLNQIA EKLSVTDLEG IKPFVSELYE DAVKKTMRRL IVEKGIRADG RKPTEIRPIS CEVGLFPRTH GSALFTRGET QSLGIVTLGA PMDVQIIDTL LEEGVKRFML HYNFPPFCTG EVKPLRGPSR REIGHGHLAE RALKNMLPPE EEFPYTIRVV SEILESNGSS SMATVCSGSL ALMDAGVPIK KHVAGIAMGL ILEEDAEIIL TDIIGMEDHY GDMDFKVAGT RDGITAFQMD CKVSGVSDEL LMKALMQARE ARMYILDRMY ETISAPRPHL SKYAPIIKVT KVDPEKVADV IGPGGRVIKK IIKDFDVKVE IDDETGLVKV VGSSEENVDK AIELIREIAK EIEVGEVLEG KVTRIEPYGL FIEVRPGKIG LLHQSKVGED MRQFLKKVKV GDTIKVQVIN IDDLGRLQFK RVTEGENTQH GKTHSKRN
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