| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1404 |
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| Symbol | |
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| ID | 5171247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1394771 |
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| End bp | 1396048 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563931 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001244993 |
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| Protein GI | 148270533 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0506465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGATA TAAAGCTCAT CAGACAAAAT CCCGATCTCG TGAAAGAAGC CCTCAGAAAA
CGAGGAGAGG ATCCTGCTAC AATCGATGAG ATTTTGAAGA TCGATGCCGA CTGGCGCACT
ACCATCACGA AAACAAACGA GCTGAGATCC AGAAGAAACG AAATTTCCAA AAATGTGGCA
AGGTTGAAAA AAGAAGGGAA AAACACAGAG GCAGAGGCAC TCATCGAAGA AGGGAAAAGA
TTAGGAGAAG AGATAAAAGC GTTAGAAGAA AAAGAAAAAG AACTTCAGAA GCAGTTGAAC
GACCTCCTTT TGATGGTCCC GAACATCCCA CATGAGAGCG TTCCCGTTGG AGAAGACGAA
TCCCAGAACG TTGAAGTGAG AAGGTGGGGA GAGCCGAGAG AATTCGATTT CACCCCGCTC
GCTCACTGGG ACCTCGGACC CGCGTGGGGG CTCATGGATT TCGACAGGGC GACCAAACTC
AGCGGTTCCA GATTCACCGT CATGTATGGA AAACTCGCAA GACTCGAGAG AGCTCTGATA
AACTTCATGC TTGACGTTCA TACAAAGGAA CACGGTTACA CGGAAGTGTG GGTCCCACAT
CTGGTGAAAA GGGAAACCAT CACTATAACC GGACAGCTTC CCAAATTCGA AGAAGAGCTT
TACCTCGCTG AGAGGGATGA CCTGTTCCTC ATTCCGACGG CTGAGGTTCC CCTCGCAGCG
CTTCACAGTG GAGAGATCCT CGAAGAGAAA GAACTACCGA AGAAATACGT CGCTTACACT
CCCTGTTACC GTAGAGAAGC GGGAAGTTAC GGGAAAGATG TGAGGGGGAT GATCAGACAG
CATCAATTCG ACAAGGTCGA GCTCGTCTGG GTGACCACAC CGGAAAGATC TTTCGAAGAT
CTTGAACAGC TTGTGAAAGA CGCCGAAACC ATTCTTCAAA AACTGGAGCT CCCATACAGA
GTCGTTTCGC TCTGTACGGG AGATCTCGGG TTCACCTCCG CAAAAACCTA CGATATAGAA
GTGTGGCTTC CTTCCTACAA CGCATACAAA GAGATATCTT CCTGCAGTAA CGTGACGGAC
TTTCAGGCAA GAAGAGGAAA CATGAGATAC AGAAGGAGAT CGGATGGAAA GCTCGAATAC
GTTCACACGT TGAACGGATC GGGCATTGCC GTTGGAAGGG CACTCGTTGC GATACTGGAA
AACTACCAGC AACCAGACGG CAGTGTGAGA GTGCCGGAGG TGCTCGTTCC CTACACAGGG
TTCGAGGTGA TACCGTAG
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| Protein sequence | MIDIKLIRQN PDLVKEALRK RGEDPATIDE ILKIDADWRT TITKTNELRS RRNEISKNVA
RLKKEGKNTE AEALIEEGKR LGEEIKALEE KEKELQKQLN DLLLMVPNIP HESVPVGEDE
SQNVEVRRWG EPREFDFTPL AHWDLGPAWG LMDFDRATKL SGSRFTVMYG KLARLERALI
NFMLDVHTKE HGYTEVWVPH LVKRETITIT GQLPKFEEEL YLAERDDLFL IPTAEVPLAA
LHSGEILEEK ELPKKYVAYT PCYRREAGSY GKDVRGMIRQ HQFDKVELVW VTTPERSFED
LEQLVKDAET ILQKLELPYR VVSLCTGDLG FTSAKTYDIE VWLPSYNAYK EISSCSNVTD
FQARRGNMRY RRRSDGKLEY VHTLNGSGIA VGRALVAILE NYQQPDGSVR VPEVLVPYTG
FEVIP
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