| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1390 |
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| Symbol | |
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| ID | 5171469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1383706 |
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| End bp | 1384374 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563916 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001244980 |
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| Protein GI | 148270520 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGTAG CGATTCTCCT TGCAGCGGGA AAAGGTGAAA GAATGTCTGA AAACGTTCCA
AAACAGTTCC TCGAGATAGA GGGAAGGATG CTTTTCGAGT ATCCGCTTTC CACGTTTTTG
AAAAGTGAAG CGATAGATGG TGTTGTAATA GTGACACGAA GAGAGTGGTT CGAAGTTGTA
GAGAAAAGAG TGTTCCACGA AAAAGTACTC GGAATTGTCG AGGGTGGAGA TACACGAAGC
CAGAGTGTGA GAAGCGCCCT CGAATTTCTT GAAAAGTTCT CTCCCTCTTA CGTTCTCGTA
CACGACTCAG CACGACCGTT TCTGAGAAAG AAACACGTGT CTGAGGTTCT CAGAAGAGCC
CGCGAAACGG GAGCGGCAAC CCTCGCGTTG AAGAATTCCG ATGCGCTCGT AAGAGTTGAG
AACGACAGAA TGGAATACAT CCCAAGAAAA GGAGTGTACA GAATTCTTAC ACCGCAGGCT
TTTTCTTACG AGATTTTGAA AAAGGCCCAT GAAAACGGTG GCGAATGGGC AGACGACACG
GAACCCGTTC AAAAGCTCGG AGTGAAAATA GCTTTGGTCG AAGGAGATCC TCTGTGTTTC
AAAGTGACGT TTAAAGAAGA TCTGGAACTG GCGAGAATCA TCGCCAGAGA ATGGGAGAGG
ATACCATGA
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| Protein sequence | MNVAILLAAG KGERMSENVP KQFLEIEGRM LFEYPLSTFL KSEAIDGVVI VTRREWFEVV
EKRVFHEKVL GIVEGGDTRS QSVRSALEFL EKFSPSYVLV HDSARPFLRK KHVSEVLRRA
RETGAATLAL KNSDALVRVE NDRMEYIPRK GVYRILTPQA FSYEILKKAH ENGGEWADDT
EPVQKLGVKI ALVEGDPLCF KVTFKEDLEL ARIIAREWER IP
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