| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1383 |
|---|
| Symbol | |
|---|
| ID | 5171244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1375813 |
|---|
| End bp | 1376967 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640563909 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_001244973 |
|---|
| Protein GI | 148270513 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000831703 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGT TTCTTAAGAA ACACTACATA ATGGCACCCG GACCAACTCC AGTACCAAAC
GATATTTTAA CAGAAGGAGC GAAGGAAACA ATCCACCACA GAACACCTCA GTTCATTTCC
ATAATGGAAG AAACCCTCGA AAACGCAAAG TACGTCTTCC AAACAAAAAA CAACGTGTAC
GCCTTTGCTT CTACGGGAAC AGGAGCTATG GAGGCGGCGG TGGCGAATCT CGTTAGTCCC
GGAGACAAGG CGATAGTGGT TGTGGCCGGG AAATTCGGTG AAAGATGGAA AGAGCTCTGT
CAGGCTTACG GTGCCGATAT CGTAGAAATC GCCCTCGAAT GGGGAGACGC GGTCACACCT
GAACAGATCG AAGAGGCTCT CAACAAAAAC CCCGATGCGA AAGTCGTTTT CACCACCTAC
AGTGAAACCT CGACAGGTAC AGTCATAGAC CTTGAAGGAA TCGCCAGAGT CACGAAGGAA
AAAGACGTTG TTCTTGTAAC AGACGCTGTC AGCGCTCTTG GGGCAGAACC ACTGAAGATG
GACGAGTGGG GTGTAGACGT CGTTGTCACA GGTTCTCAGA AGGGTTTGAT GTTGCCTCCT
GGACTGGCTC TCATCTCTCT CAACGACAAA GCGTGGGAGC TCGTGGAAAA ATCCAGGTCT
CCAAGATATT ACTTCGATCT GAGGGCCTAC AAGAAATCTT ACCCTGACAA TCCTTACACT
CCCGCAGTAA ATATGATATA CATGTTGAGA AAGGCTCTTC AGATGATAAA AGAGGAAGGC
ATAGAGAACG TGTGGGAAAG GCACAGAATA CTGGGAGACG CGACAAGAGC GGCGGTGAAA
GCACTTGGAT TGGAACTCCT TTCGAAAAGA CCAGGAAACG TTGTAACGGC TGTGAAAGTA
CCTGAGGGTA TCGATGGAAA ACAGATTCCC AAGATTATGA GAGACAAATA CGGTGTGAGC
ATTGCCGGTG GACAAGGAAA ACTCAAAGGA AAGATATTCA GGATAGCACA TCTCGGCTAC
ATGTCACCCT TCGACACCAT AACCGCCATC TCCGCTCTTG AATTTACCTT GAAAGAACTC
GGTTATGAAT TCGAACTCGG AGCCGGTGTT AAAGCAGCCG AAGCCGTCTT CGCTAAAGAA
TTCATTGGGG AGTGA
|
|---|
| Protein sequence | MGKFLKKHYI MAPGPTPVPN DILTEGAKET IHHRTPQFIS IMEETLENAK YVFQTKNNVY
AFASTGTGAM EAAVANLVSP GDKAIVVVAG KFGERWKELC QAYGADIVEI ALEWGDAVTP
EQIEEALNKN PDAKVVFTTY SETSTGTVID LEGIARVTKE KDVVLVTDAV SALGAEPLKM
DEWGVDVVVT GSQKGLMLPP GLALISLNDK AWELVEKSRS PRYYFDLRAY KKSYPDNPYT
PAVNMIYMLR KALQMIKEEG IENVWERHRI LGDATRAAVK ALGLELLSKR PGNVVTAVKV
PEGIDGKQIP KIMRDKYGVS IAGGQGKLKG KIFRIAHLGY MSPFDTITAI SALEFTLKEL
GYEFELGAGV KAAEAVFAKE FIGE
|
|---|
| |