Gene Tpet_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1375 
Symbol 
ID5171575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1367182 
End bp1367799 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content45% 
IMG OID640563900 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001244965 
Protein GI148270505 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000233734 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGAA AATCCACCGA TGGGTGGATT TCTTCTCTGA TAAACAGGAG ATTTTCCTCA 
AGGATCACAA ATCTCATTCT CGAGAAAAAC TGGCAGATAA CACCCAATCA GATGTCTTTC 
ATCAGCTTTC TTGTTGGTGT TCTCGCGTTT CCGTTTTATC TTCTCAAAGT TCCATGGATC 
GCAGGAATTC TTGTTCAGGT TTCTTCTGTT CTGGACGGAG TGGATGGGGA GCTCGCACGC 
GCAAGAAATG TGTCTTCAAA CTGGGGAGCT TTTTTCGATA CGATGTTGGA CAGGTTCGTG 
GATATACTGG CCGTTCTTGG GCTGTCTCTT TACGGTTACT TGAAAGATGG TCCCTCTCTT 
TCTTTACTCT TCTGGTCGGT TCTTGCCGTC AGCGGTTCTC TCATGGTGAG TTACCTTCAC 
AGTGTTGGGA AGGTGTTTGG TACCCACCCG GCTCTCGTCG GAAAACTATC CGGTTTTGCT 
TCCAGGGATG TTAGGTTGTT CGTTGTATTC GTTTTTTCTC TCTTTGGAAT GTATCTTCCT 
GCTCTTGTAG TTATCTCGAT CCTGTCGTAT GTTTACACTA CTGGGAAATT CGTGGAACTT 
TTGGTGCTCA ACAGGTGA
 
Protein sequence
MLRKSTDGWI SSLINRRFSS RITNLILEKN WQITPNQMSF ISFLVGVLAF PFYLLKVPWI 
AGILVQVSSV LDGVDGELAR ARNVSSNWGA FFDTMLDRFV DILAVLGLSL YGYLKDGPSL 
SLLFWSVLAV SGSLMVSYLH SVGKVFGTHP ALVGKLSGFA SRDVRLFVVF VFSLFGMYLP 
ALVVISILSY VYTTGKFVEL LVLNR