| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1365 |
|---|
| Symbol | |
|---|
| ID | 5170136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1355357 |
|---|
| End bp | 1357057 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640563890 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001244955 |
|---|
| Protein GI | 148270495 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGTA TCGCCTCTAA AGTTCTGGTA ATCGGCGTGG TGATTGTCCT GGCGTTTTTT
GTGACACAGT ACGTTCTTTT GAACACGACC GTTTTCAACT CGATCATGGA AAGGAAAAAA
GAAGAAGTAA AACATCTGGT TGAATCCGTG TACGGTATTC TGGAGAGAGC CTACGAAATG
GAGCAAAAAG GAGAGCTCAC AAGAGAACAG GCGCAGGAAC TGGCAAAATC ACTGATAGGA
AAGATCAGGT ACGACGACAA CAACTACTTC TGGATCAACG ACACCTATCC CAGGATGGTG
TTTCATCCCA CCAAACCAGA ATTGAACGGT CAGGATCTGA GCAACTACAA GGACCCGAAC
GGTGTGTACC TGTTCAACGA AATGGTGAAA GTAGCGAAAG AAAAAGGAGA AGGGTTCGTC
TCTTATTCTT GGCCCAAAGC AGGAAGCGAC AAACCAGAAC CCAAGGTCTC TTACGTGAAA
CTCTTCGAAC CCTGGGGATG GATCGTCGGA ACTGGAATAT ACGTGGATGA TGTGAAAGTA
GCAGTTGGAA ATCTCATATT TGAAGATGTG ATAGTAATTC TAGTAATAGG AATCGCAGTG
ATAATAGCGG TCTTCTTCTA TGGAAGAGTG CTTTCGAGAA AGACAAAAGC CGTTTTGGTT
GCCCTCGAGA AGATATCGAG TGGAGATCTG TCTGTCTCCG TTGATATAAA ATCGAAGGAT
GAGTTCGGTC TCATAGCACA GAAATTAAAC GAAACCGTTG GAAATCTCAG AAAGATGGTT
CAGGAGATCG ATAAATCTCA AGACGAGGTG GAGAGAGTTT CTGAGGAGCT TTTTGCCCTC
TCCCAGCAGC TTCGCAGTGC CCTTGAAGAG ATAGCGAGAG CTTCTGAGAC GATCAGCAAA
GAGGTTCAGA ACGCTTCCGC GTCCATAGAG GAAGTCACAT CAGGTTCCGA AGAGGTTTCT
GCCAACTCTC AGAATATCTC TAAACTCATC CAGGAGATCT CAGAAAACGC GGACAACATA
GCAGATTTCG CGAGGAACGG TCAGAGGGTC CTCGAAGAGG CGGTCAAAAA GGTGGAAGAC
GTCTCAGAGA ATTCCAGAGA AACAGCCGAT GTCGTTTCGA GTGTGACGGA GAGCGCAAGA
AACATCGAGG AGATCGTAAG AACCATCCAG AGTATCGCAG AGCAGACGAA CCTCCTAGCA
CTGAACGCGG CTATAGAGGC AGCAAGAGCA GGAGAAGCGG GAAGAGGATT TGCGGTGGTT
GCCGATGAGA TCAGAAAACT CGCCGAGGAA AGCCAGAGAG CGACGGAAGA GATCAGCCAG
ATCCTCGAAA ACATCAGAGA AGGTGTTGAA AAAACGAACG AAATGTCGAA AGAGAACGTG
GAGATCACGA AGGATGCCAA GAGACTGGTC GAAGAATCCT ACGAAAGCTT CAACCAGATC
GTGGCCAGAA TAGAAGATCT TGCCGCAAGA ATCGAAGGAA TCGCTGCAAG CGCACAGGAA
CTCAGTGCGG CCTCTGAAGA GATGAGCAGT GCGCTCGACG CGGTTGCCAA GACAACCACA
ACGGTCGCCA GCGAAATAGA AGAGGTATCC GCGCACATCA CGGAACAGGA AAAGGCTGCA
AGAAGGATCG CGGATGCCGG AACGGAGCTG AAGAGACTCT CGGATGAGCT GAAAAAAGAT
GTGGAAAGGT TCAGGATCTA A
|
|---|
| Protein sequence | MRSIASKVLV IGVVIVLAFF VTQYVLLNTT VFNSIMERKK EEVKHLVESV YGILERAYEM
EQKGELTREQ AQELAKSLIG KIRYDDNNYF WINDTYPRMV FHPTKPELNG QDLSNYKDPN
GVYLFNEMVK VAKEKGEGFV SYSWPKAGSD KPEPKVSYVK LFEPWGWIVG TGIYVDDVKV
AVGNLIFEDV IVILVIGIAV IIAVFFYGRV LSRKTKAVLV ALEKISSGDL SVSVDIKSKD
EFGLIAQKLN ETVGNLRKMV QEIDKSQDEV ERVSEELFAL SQQLRSALEE IARASETISK
EVQNASASIE EVTSGSEEVS ANSQNISKLI QEISENADNI ADFARNGQRV LEEAVKKVED
VSENSRETAD VVSSVTESAR NIEEIVRTIQ SIAEQTNLLA LNAAIEAARA GEAGRGFAVV
ADEIRKLAEE SQRATEEISQ ILENIREGVE KTNEMSKENV EITKDAKRLV EESYESFNQI
VARIEDLAAR IEGIAASAQE LSAASEEMSS ALDAVAKTTT TVASEIEEVS AHITEQEKAA
RRIADAGTEL KRLSDELKKD VERFRI
|
|---|
| |