| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1353 |
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| Symbol | aspS |
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| ID | 5169948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1343524 |
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| End bp | 1345263 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563878 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001244943 |
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| Protein GI | 148270483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000395014 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGAA CTCACACGTG TGGAGAATTG AGAGCAACAG ACGAGGGAAA GAAAGTGAAA
CTGTGTGGAT GGGTGGACAG GATCAGAGAC CTCGGCGGTG TGAGATTCAT CGACTTGAGA
GACAGATACG GTGAAACTCA AATCGTGTGC GATGTGAACA GTGAAGCTTA CAGCGTTGTG
GACGAACTCA CAAGAGAATC CGTCGTTCTG GTTGAGGGAA TTGTGAGAAA AAGGCCGGAA
GGAACGGAAA ATCCGAACAT CGAAACAGGA GAAATAGAGG TCGTTGCCGA AAAAATAGAG
ATCCTGTCTC TTGCCGATCC GCTTCCTTTT TATCCTGGTG AAGCACCAAA GGAAGAAATG
AGACTCAAGT ACAGATACAT AGATCTTCGT TCCGAGAGAA TGAAGAGAAA TATCATTTTG
AGATACAAAG TATCAAAAAT CATCAGAGAT TACTTCGATG AACTCGGTTT CCTTGAAATA
GAAACTCCCT TTCTCACGAG AAGCACTCCG GAAGGAGCAA GGGATTTCCT CGTACCTTCG
AGACTCAGGC CCGGAAAGTT CTACGCACTG CCTCAATCTC CTCAGCTTTT CAAACAGATC
TTGATGATCT CCGGCTTCGA TAGATACTTC CAGATAGTCA GATGCTTCAG GGACGAAGAC
CTTAGAGCAG ACAGGCAACC GGAGTTCACC CAGGTTGACG TGGAGATGTC TTTTGTCGAT
GTAGAAGATG TGCTGAATGT GAGCGAAAGA ATGATTTCAA GAGTGTTCAG AGAATCTTTG
GGCGTCGATC TCGAAGTTCC TTTCGACAGA ATCACGTACG ACGAAGCGAT GGAAAAGTAT
GGAACGGACA AACCAGACAG AAGATTCGGA ATGGAACTTC GAGATTTTGG ATACGCTTTT
GTGAACACAG AATTCAAGGT GGTAAGGAAC GTTCTCGATG AAGGAGGAAG CGTGAAAGGA
TTCATCGTTC CCAGATTCGC TTCGGAGATG AGCAGAAAGA AAGGCGAAGA ACTAATGGCG
AGAATGAAAG AACTCGGTCT CGGCGGTCTC ATCTGGTTCA AAGTGGAAGG TGGAATCACA
TCGCCACACC TGAAACACCT TGAAAAAGAA TTCAGAAAAA TTGCAGAAAC GGAAAACATG
AACGAAGAAG ACGTCTGTCT CATAGCGGCC CACACTGATA GAAACCTCCT CAACGAAGCC
CTTGGAACGC TGAGGCTGGA AATCGGAAAA GAACGCTTCT CGCACCTTGC CAGAGGATTC
GACGTACTCT GGGTAGTTGA TTTTCCATAC TTCGAGTGGA GCGAGGAAGA AGAGAGATTC
GTCGCACGGC ACCACCCCTT CACAATGCCC GTCCTGGAAA CCTTGGGTGA TGATTACACG
AAAGTTCGAG CGAAAGCCTA CGACCTGGTC ATTAACGGCT ACGAAGTCGG CGGAGGAAGT
ATCAGAATTC ACAGAAGGGA TATTCAGGAG AAAATCTTCA AACTTCTTGG GTTGAGCGAG
GAGGAAGCAC AGAAAAAATT TGGTTTCTTC CTTGAAGCGT TCAGGTACGG TGTTCCACCA
CACGGTGGGA TAGCTTTCGG ACTGGATCGA TTGGTGAGCA TCATAGCCGG TGAGAGTTCC
ATAAGAGAAG TGATCGCGTT TCCAAAGACA GGAAACGGTG TGTGTCTCTT GACAGGGGCT
CCCGCTGAAG TTGATGAAAG ACAACTCAGA GAACTCAGAA TCAGAATAGA GGAGGGATAA
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| Protein sequence | MLRTHTCGEL RATDEGKKVK LCGWVDRIRD LGGVRFIDLR DRYGETQIVC DVNSEAYSVV
DELTRESVVL VEGIVRKRPE GTENPNIETG EIEVVAEKIE ILSLADPLPF YPGEAPKEEM
RLKYRYIDLR SERMKRNIIL RYKVSKIIRD YFDELGFLEI ETPFLTRSTP EGARDFLVPS
RLRPGKFYAL PQSPQLFKQI LMISGFDRYF QIVRCFRDED LRADRQPEFT QVDVEMSFVD
VEDVLNVSER MISRVFRESL GVDLEVPFDR ITYDEAMEKY GTDKPDRRFG MELRDFGYAF
VNTEFKVVRN VLDEGGSVKG FIVPRFASEM SRKKGEELMA RMKELGLGGL IWFKVEGGIT
SPHLKHLEKE FRKIAETENM NEEDVCLIAA HTDRNLLNEA LGTLRLEIGK ERFSHLARGF
DVLWVVDFPY FEWSEEEERF VARHHPFTMP VLETLGDDYT KVRAKAYDLV INGYEVGGGS
IRIHRRDIQE KIFKLLGLSE EEAQKKFGFF LEAFRYGVPP HGGIAFGLDR LVSIIAGESS
IREVIAFPKT GNGVCLLTGA PAEVDERQLR ELRIRIEEG
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