| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1336 |
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| Symbol | rplU |
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| ID | 5170135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1327839 |
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| End bp | 1328153 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563861 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001244926 |
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| Protein GI | 148270466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000100172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTACGCCA TCGTAGAAAC GGCTGGCAGG CAGTACAGGG TCGAAGAAGG AAAGATTCTC
TACACTGAAA AGCAGAAAGA TTACTCCCCG GGTGATGAGA TCGTCTTTGA CAGAGTGGTG
TTCGTCAGGA AGGACGGAGA GGTGCTCGTC GGAAAACCTT ATGTTGAAGG AGCTAAGGTT
GTAGGGAAGG TTCTGGAACA CGCCAAAGCC AGAAAGGTAA AGACTGTGAA GTACAGACCC
AGAAAGAACA GTAAGGTGGA AAAAGGTCAC AGACAGTGGT ACACCGCCAT CAAAATTGAA
AAGATTGAAC TATGA
|
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| Protein sequence | MYAIVETAGR QYRVEEGKIL YTEKQKDYSP GDEIVFDRVV FVRKDGEVLV GKPYVEGAKV
VGKVLEHAKA RKVKTVKYRP RKNSKVEKGH RQWYTAIKIE KIEL
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