Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1270 |
Symbol | |
ID | 5170881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1283061 |
End bp | 1283771 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563795 |
Product | diaminopimelate epimerase |
Protein accession | YP_001244860 |
Protein GI | 148270400 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000437124 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGCTATT CGGCCAATGG GAACACCTTC CTCATAGTTG ACAACACGCA AAAGAGGATA CCCGAAGAGA AAAAACCAGA TTTTGTCAGG GAAAACGTGG GCGATCTGGA TGGAGTCATA TTCGTGGAGC TGGTCGATGG GAAATACTTC ATGGACTACT ACAACCGCGA TGGGAGTATG GCGGCCTTCT GTGGGAACGG CGCAAGGGCC TTTTCTCAGT ACCTCATAGA CAGGGGCTGG ATCAAAGAAA AAGAATTCAC TTTCCTTTCC AGAGCTGGAG AAATAAAGGT AATCGTTGAC GACAGTATCT GGGTGAGGAT GCCGGGTGTT TCAGAAAAGA AAGAGATGAA GGTGGATGAT TACGAAGGAT ATTTCGTCGT TGTGGGCGTT CCTCATTTCG TTATGGAAGT GAAAGGAATC GACGAACTGG ATGTGGAAAA ACTCGGAAGA GATCTCAGGT ACAAAACAGG CGCGAACGTG GATTTCTACG AGGTACTTCC CGACCGCCTC AAGGTGAGAA CATACGAAAG AGGAGTGGAA AGGGAAACAA AAGCCTGTGG AACGGGTGTT ACGTCTGTTT TCGCCGTGTA TCGAGATAAA ACAGGGGCAA AAGAGGTGAA GATCCAGGTA CCAGGAGGTA CGCTCTTTCT GAAAGAAGAA AACGGAGAAA TCTTTCTCAG GGGGGATGTG AAAAGATGTT CAGAGGAGTA G
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Protein sequence | MCYSANGNTF LIVDNTQKRI PEEKKPDFVR ENVGDLDGVI FVELVDGKYF MDYYNRDGSM AAFCGNGARA FSQYLIDRGW IKEKEFTFLS RAGEIKVIVD DSIWVRMPGV SEKKEMKVDD YEGYFVVVGV PHFVMEVKGI DELDVEKLGR DLRYKTGANV DFYEVLPDRL KVRTYERGVE RETKACGTGV TSVFAVYRDK TGAKEVKIQV PGGTLFLKEE NGEIFLRGDV KRCSEE
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