Gene Tpet_1263 details

Gene Information

• Locus tag: Tpet_1263
• ID: 5171368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 1276761
• End bp: 1277387
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640563788
• Product: abortive infection protein
• Protein accession: YP_001244853
• Protein GI: 148270393

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.568242
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGATGG TTAAAAGAAT CTCTGAGATA AGTTTCCTTT CAGTTTTGAT CGGACTTTTT 
TTAGGATGGT ATTTCGTCTT TCAGGTGAAT ATGCTCGATT TCTGGTGGAG AATGTTCATG 
ACCACTCTGA TTTTTTCTGT GATTTCGATC TTTCTTGGCG GAAAGAGGAA CATAAAGCCA 
AATAAGTACG AGGCGCCCCT TGCGATCTAC TCCGCTGTAG CAGCTTATCT TCTTTTCGTC 
GTTGGATATT TGATTTCGCT TTTGATTCCT CCGTTTCACA GGGATGTTGT CAGTGTTTAC 
GGACTCGCGG AAGGGCAAAA TGCATTGAAA GTGATCATTC TTCTCGTGTT CATAGCCTTT 
TTTGAAGAGA TCATATGGCG TGGTTTTGTA ACAGAATTCC TTCTCCAACG GCTGGACGTT 
GTTCCTTCAA TACTGATCTC TTCGCTTCTT TACAGCGTAG TCCACGTGTT CACTGGAAAT 
ATGGCTTTGA TAGTGGGGGC GTTTGTCCTT GGGATAATTC TTTCTCTTCT TTATGTGATC 
ACTGGAAAGG TCAGCACACC AGCTTTTGCG CATGCGCTGT GGAGCCTTCT CATATTCGTT 
GTTTTGCCTC TGAAAGGGGG TTTTTGA 

 

Protein sequence

MPMVKRISEI SFLSVLIGLF LGWYFVFQVN MLDFWWRMFM TTLIFSVISI FLGGKRNIKP 
NKYEAPLAIY SAVAAYLLFV VGYLISLLIP PFHRDVVSVY GLAEGQNALK VIILLVFIAF 
FEEIIWRGFV TEFLLQRLDV VPSILISSLL YSVVHVFTGN MALIVGAFVL GIILSLLYVI 
TGKVSTPAFA HALWSLLIFV VLPLKGGF