| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1251 |
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| Symbol | |
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| ID | 5171185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1267287 |
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| End bp | 1268129 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563776 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001244841 |
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| Protein GI | 148270381 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
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| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.792381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATAGTGC TCATCTCCTC CTTCCTCTTT TCTGAAACTC TGACGTTGAA GGAAACGCTC
CTGGCTTCGC CAGGAGTTCT TTTCTTAGAT GACATCACGA TCGAAAAAGT AGAATCTGAA
AAGAATCTGA TGATTCTCCT GCCCGGGCTC GAATATCTCG TGACCAGAGA TCTCCTCAGA
ACAAAATTTC CAGAGTACGA TTTCACAGGT CCAGAAAGCG TGAGAATAAC TGTGGAAGGA
TCCAGCAGTC TCAAAAACAC TGTTTTCGAA GAGATAGGAA AGAAAGCGGG AACAGAAGAC
TTCGAAGCCT TCGTGGTGAA GACCTTTGGA ACTCTGCCGG AGAAATTTGA ACCTCAAACG
ATCAGAGTAA CGAAAATCTC GAAAAATCTC TTCAGCGTCT TTCTGAGGTT TCCGGAAACA
TACGTGACCC TCAACATGTT GCTACGCAAA GAAAGGAATG TGGTGGTTCT GAAGAGAAAT
ATAAATGTGG GCGATGTGAT AAAGGAAGAA GACGTGAGAC TGGAAAAGAA AAACGTGTTC
GAGATCTATG GAGAGCCGTT CTTCGACGTT TCAGAGGTGG TCGGAAAGAT ATCCAGAAGA
TACCTGAAAG AGGGAACCGT TCTGACTGCG GACATGGTGA AAGATCCCCC CGACGTGGTG
AAAGGCCAGG TGGTTCCAGC TTACGTGGAC ATGGGCAGCA TAAAGGTAAC AACGTTCGTT
GAGGTTTTGG AAAACGGCTA TCTCGGTGAA ACGGTGAGGG CGATGAACGT AGAGAGCAGA
AAATACGTCT TTGGAAGAGT TGAGAGAGGA CCTGTATTGA GAATTCTGGA GGTGGTAGAG
TGA
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| Protein sequence | MIVLISSFLF SETLTLKETL LASPGVLFLD DITIEKVESE KNLMILLPGL EYLVTRDLLR
TKFPEYDFTG PESVRITVEG SSSLKNTVFE EIGKKAGTED FEAFVVKTFG TLPEKFEPQT
IRVTKISKNL FSVFLRFPET YVTLNMLLRK ERNVVVLKRN INVGDVIKEE DVRLEKKNVF
EIYGEPFFDV SEVVGKISRR YLKEGTVLTA DMVKDPPDVV KGQVVPAYVD MGSIKVTTFV
EVLENGYLGE TVRAMNVESR KYVFGRVERG PVLRILEVVE
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