Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1239 |
Symbol | |
ID | 5170821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1253510 |
End bp | 1254559 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563763 |
Product | ApbE family lipoprotein |
Protein accession | YP_001244829 |
Protein GI | 148270369 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCCGT CAGATAGCAA CGATCATCGG GTAACCAGAA GAAACGTCAT CATCTTTTCT TCACTTCTTC TAGGTTCTCT TGCGATTCTC TTGGCTTTAC TCCTCATCCG AACGAAAGAT CAGTATTATG AGCTCAGAGA TTTCGCTCTC GGAACGAGTG TGAGGATAGT CGTTTCCTCT CAGAAGATAA ATCCCAGAAC GATCGCAGAA GCCATTCTGG AAGACATGAA GAGGATTACC TACAAGTTTT CTTTCACGGA TGAAAGAAGT GTTGTGAAAA AGATAAACGA TCATCCCAAC GAATGGGTCG AGGTGGACGA AGAGACTTAC AGTTTGATCA AAGCGGCCTG CGCGTTCGCA GAGCTCACAG ATGGAGCGTT TGATCCGACA GTAGGAAGGC TTCTCGAACT CTGGGGGTTT ACCGGAAACT ACGAAAATCT CAGGGTACCT TCTCGAGAAG AGATCGAAGA AGCTCTGAAG CATATCGGAT ATAAAAACGT TCTCTTCGAC GATAAGAACA TGAGAGTGAT GGTTAAAAAC GGTGTGAAGA TCGATCTTGG TGGTATAGCG AAAGGGTACG CCCTTGACAG AACTAGGCAG ATAGCACTCT CTTTTGACGA GAACGCAACG GGGTTTGTCG AAGCAGGTGG GGATATTCGT ATCATCGGGC CAAAATTTGG AAAGTATCCG TGGGTGATAG GAGTAAAAGA TCCCAGGGAA GACAACGTGA TAGATTACAT CTATCTGAAA TCCGGAGCGG TTGCGACTTC CGGTGATTAC GAAAGATATT TCGTTGTGGA CGGTGTCAGG TATCATCATA TTCTCGATCC TTCAACGGGG TATCCTGCTC GTGGTGTGTG GAGCGTAACG ATCGTAGCCG AAGATGCCAC CACAGCCGAC GCACTCTCCA CAGCGGGCTT TGTGATGGCC GGAAAAGACT GGAGGAAGGT GGTGCTCGAT TTTCCAAATA TGGGAGCTCA TCCGCTGATA GTTCTTGAAG GAGGAACGAT CGAAAAGTCT GAGACCTTCA AGCTGTTCGA AAGAGAGTGA
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Protein sequence | MWPSDSNDHR VTRRNVIIFS SLLLGSLAIL LALLLIRTKD QYYELRDFAL GTSVRIVVSS QKINPRTIAE AILEDMKRIT YKFSFTDERS VVKKINDHPN EWVEVDEETY SLIKAACAFA ELTDGAFDPT VGRLLELWGF TGNYENLRVP SREEIEEALK HIGYKNVLFD DKNMRVMVKN GVKIDLGGIA KGYALDRTRQ IALSFDENAT GFVEAGGDIR IIGPKFGKYP WVIGVKDPRE DNVIDYIYLK SGAVATSGDY ERYFVVDGVR YHHILDPSTG YPARGVWSVT IVAEDATTAD ALSTAGFVMA GKDWRKVVLD FPNMGAHPLI VLEGGTIEKS ETFKLFERE
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