| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1189 |
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| Symbol | |
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| ID | 5170890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1210218 |
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| End bp | 1211486 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563708 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001244779 |
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| Protein GI | 148270319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00252456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAG ACGAAATAGT TGAAAAATAC GTGGACAGAA AAACTCAGAG AAGGTTTCTC
ATCCTCACTT CTATCGCCTG GATGTTCGAC GCTGCCGGTG TTATGCTTCT TTCTTTTGTG
CTTCCTTACG TGATAAAGGA ATGGAATCTC ACCTCTACTC AGGGAGCTAC CATAGCGAGT
GCTACCTTCC TTGGAATGCT TTTTGGAGCG CTTTCTGTGG GGTTCGTGGC TGACCTTCTT
GGAAGGAAAG TTTCCAATCT GTTCTTTTTC ATCGTAACGA TCACCTTCAC TTTTCTGTCC
GGCTTTTCCT CATCGTTCGA AACTCTTTTA GTTCTGAGAG GCCTTTCGGG TTTTGGGTAT
GGAGGCTTGA TGCCTTCGTT CAACGCGTAT CTTGCAGAAT TCACGAGTAT CAGACTCAGG
GGAAGGTATC TTGTGCTTCT GGAGTCGAGC TGGGCGGTTG GGAGTATACT GATAGGACTC
TTCGCAGTGA ATGTTCTCCC GAACTGGAGA TGGGTCTTCT GGATCTTCTC CATCGGGTAC
CTTTTTGTTC CGGTGTTTCT TAGGATGCCC GAAACTCCAA AGTACGCGTT TTTGAAGGGT
GGAAAAGAAG CGCTGGAAAG GTCTCTGGGT AAAAGAGTGG AGGAAGAGGT GGAGCTTCCA
AAAAAAGAGA AAGTTCCCAT CCTGGCTCTT TTGAAGAGGG AACATTTGAA AGACACAGTT
GTGATCTGGA TAGCGTGGTT CGTTGTGAGC TTCGTGTATT ACGCTCTGTT CACCTGGGCT
CCCAGGATCT TCTCCTCGCT GGGTGTGAGT GTTGTCAAAT CTTCCTGGTT CACATTCTAC
ATGATGGTGG CACAGCTTCC CGGGTACCTT TCGGCAGCCT ACTTCATAGA AAAATGGGGA
AGAAAGGCTT CTCTTGGTGT TTACTTCATA GGAACAGGAC TTGTCGCTCT GCTGTGGGCC
AACGTGAGAG GAGATGCTTC GCTTCTTGCA GCTGCTTTGG TCCTTTCTTT CTTCTGTCTT
GGAGTGTGGG GACTGGTCTA TGCCTACACA CCGGAGCTGT ATCCCACGCC GCTCAGGGGG
ACTGGAAACG GAGCAGCGGG AGTATGGGCA AGGATAGCGG GTATAATAGC TCCTTACTAC
ACAGGCTTCA TGATGGAGAA AGGAAAAAGC ATCGCGGAAA CCCTCGCATG GATCTCCGCG
ATGGCAATGT TTGCCGGTGT GATCGTTCTG ATGTTTGGAA GAGAAACAAA GGGGAAATAC
GTGGATTAA
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| Protein sequence | MRIDEIVEKY VDRKTQRRFL ILTSIAWMFD AAGVMLLSFV LPYVIKEWNL TSTQGATIAS
ATFLGMLFGA LSVGFVADLL GRKVSNLFFF IVTITFTFLS GFSSSFETLL VLRGLSGFGY
GGLMPSFNAY LAEFTSIRLR GRYLVLLESS WAVGSILIGL FAVNVLPNWR WVFWIFSIGY
LFVPVFLRMP ETPKYAFLKG GKEALERSLG KRVEEEVELP KKEKVPILAL LKREHLKDTV
VIWIAWFVVS FVYYALFTWA PRIFSSLGVS VVKSSWFTFY MMVAQLPGYL SAAYFIEKWG
RKASLGVYFI GTGLVALLWA NVRGDASLLA AALVLSFFCL GVWGLVYAYT PELYPTPLRG
TGNGAAGVWA RIAGIIAPYY TGFMMEKGKS IAETLAWISA MAMFAGVIVL MFGRETKGKY
VD
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