Gene Tpet_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1160 
Symbol 
ID5170310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1185274 
End bp1186059 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content43% 
IMG OID640563679 
Producthypothetical protein 
Protein accessionYP_001244750 
Protein GI148270290 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0500427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTACG TGGGAACGAG CGGTTTTTCC TTTGAAGATT GGAAAGGAGT GGTGTACCCC 
GAACATCTGA AACCTTCCCA GTTTCTGAAG TACTACTGGG CGGTGCTCGG ATTCAGAATA
GTGGAACTCA ATTTCACTTA TTACACCCAA CCATCGTGGC GCTCCTTTGT TCAGATGTTG
AGAAAGACCC CTCCCGATTT CTATTTTACC GTAAAGACAC CAGCAAGCGT CACGCACGTT
CTCTGGAAAG AGGGAAAAGA TCCAAAAGAG GACATGGAAA ATTTCACACG TCAAATAGAG
CCTCTAATAG AAGAACAAAG ACTAAAGATG ACTTTAGCAC AGTTTCCATT CTCTTTCAAA
CTCTCCAGAA AAAACGTGGA ATATCTTGAA AAATTGAGAG AAAGCTACCC GTACGAAATC
GCTGTGGAGT TCAGACACTA CTCCTGGGAC AGAGAAGAAA CATATGAATT CTTGAGAAAT
CATGGTATAA CCTTTGTGGT GGTGGACGAA CCAAAGCTTC CCGGATTGTT CCCCTATCGT
CCCATCACGA CAACTGATTA CGCCTACTTC AGATTTCATG GAAGGAACGA AAGATGGTTC
GAAGCCGAAG GGGAAGAAAG GTACGATTAC CTCTACAGTG AGGAAGAACT GAAAACTCTC
TTTGAAGATG TTGTAGAACT TTCACGAAGA GTGAAGGAAA CTTATGTCTT CTTCAACAAC
TGTTACAAAG GTCAGGCGGC GATGAACGCT TTGCAGTTTA AAAAGATGAT GGAGGAGAGA
GTGTGA
 
Protein sequence
MVYVGTSGFS FEDWKGVVYP EHLKPSQFLK YYWAVLGFRI VELNFTYYTQ PSWRSFVQML 
RKTPPDFYFT VKTPASVTHV LWKEGKDPKE DMENFTRQIE PLIEEQRLKM TLAQFPFSFK
LSRKNVEYLE KLRESYPYEI AVEFRHYSWD REETYEFLRN HGITFVVVDE PKLPGLFPYR
PITTTDYAYF RFHGRNERWF EAEGEERYDY LYSEEELKTL FEDVVELSRR VKETYVFFNN
CYKGQAAMNA LQFKKMMEER V