| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1149 |
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| Symbol | pyrB |
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| ID | 5170039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1172738 |
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| End bp | 1174321 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563668 |
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| Product | bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit |
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| Protein accession | YP_001244739 |
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| Protein GI | 148270279 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain
[COG1781] Aspartate carbamoyltransferase, regulatory subunit |
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| TIGRFAM ID | [TIGR00240] aspartate carbamoyltransferase, regulatory subunit
[TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGG ATTTTCTCGG CAGAACCCTC GCAGTCATAG AAGATCTGAG CGTGGAGGAG
CAGATGTTCC TCTATGAGAA AACCAGAGAG CTCAAACAGA GATGGTACAA CGGAGAGGAT
GTATCGGATT TCAGGATAAA GAAGAGAAAC GTTGGAATAT ACATCGTTTT CGTTGAACCA
AGCACGAGGA CGAAAGAATC CTTCATAAAC GCTGCAAAGT TTCACTCGGG TCCAAACGTG
AAGGTGAACG TTTTCGATTC GGAACATTCC TCCTTCAACA AACAAGAAAG CTACACGGAC
ACCTTCTCCA TGCTCACAGG CTACAGCGAC TACTCCATAT TCGTTGTGAG AACAAGACTC
GAAGGAGTCT GTAGACTCCT GGAAAGAAGA ATATCAGAAT TCGCAAGCAG GAACGGTATA
GAAGTACCCT CTTTTATAAA CGCGGGCGAC GGAAAGCACG AGCATCCAAC ACAGGAACTT
CTGGATGAAT ACACCTTTCT CGAGCAGAAT GGTTTTGACA ACTCGTTCAT ACATGTGGCA
CTCGTTGGTG ACCTGCTTCA CGGCCGAACG GTTCATTCCA AAGTGAACGG CTTGAAGATA
TTCAAAAATG TGAAGGTGGA TCTTGTGGCA CCGGAAGAGC TCATGATGCC AGAGCATTAC
GTAGAAAAGA TGAAAAAGAA CGGTTTCGAG GTCAGGATTT TCTCTTCGAT CAGAGAGTAT
CTCAGCCAGA AAGATGTGGC AAAGATCTGG TACTTCACAC GGCTTCAACT CGAAAGAATG
GGAGAAGACA TTCTCGAGAA GGTTCATATT CTGAGAGAAG CAGTCACTTT CAAAAAAGAG
TATCTGGACG CACTGCCGGA AGGAGTGAAG TTCTACCATC CGCTTCCAAG GCACAAGGTT
TATCCGACGA TACCGAACTT CCTGGACACA CTCCCTCTGA ACGGATGGGA AACACAGGCG
AGGAACGGTT ACTGGGTGAG GATCGTGCTT CTTTCCATGT TCGGTGGAGC GCTGGAAGCA
CCTTTCGATA CCTCGAAGAA AGAAGAAAAG CCAGAAGAAG ACTTCATAAT CCCTGCTCCC
ATCACACACG GATCAAAGGG GGTTCAAAAG GAAGGAAAAA GAGGTATAAA ACCCATTGAA
AACGGAACGG TGATAGACCA CATAGCCAAA GGAAAGACAC CGGAGGAAAT TTACTCAACA
ATTGTGAAAA TAAGGAAAAT TCTGAGACTC TACGATGTGG ACAGTGCGGA TGGTATTTTC
CGGTCGAGTG ATGGAAACTT CAAGGGCTAC ATCAGCCTGC CGGATCGTTA TCTCTCCAAG
AGAGAAATAA AAAAACTCTC GGCGATTTCT CCAAACACCA CAGTCAACAT CATAAAAAAC
AGCACGGTTG TTGAAAAATA CAGAATAAAG CTTCCACCAA CGATCTATGG ATTTGAGGAA
CTCCGATGCA AAAACGAGAA CTGCATCACC AATCCCGCAC ACGGCGAAAA TGCTTCACCT
TCCTTTGTGA GAGACGAAAA AGGACAGTTT ATATGCGAGT ACTGTGAAAC ACCGCATTCT
TTCGAAGAAA TCTGGAGTAT TTGA
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| Protein sequence | MKRDFLGRTL AVIEDLSVEE QMFLYEKTRE LKQRWYNGED VSDFRIKKRN VGIYIVFVEP
STRTKESFIN AAKFHSGPNV KVNVFDSEHS SFNKQESYTD TFSMLTGYSD YSIFVVRTRL
EGVCRLLERR ISEFASRNGI EVPSFINAGD GKHEHPTQEL LDEYTFLEQN GFDNSFIHVA
LVGDLLHGRT VHSKVNGLKI FKNVKVDLVA PEELMMPEHY VEKMKKNGFE VRIFSSIREY
LSQKDVAKIW YFTRLQLERM GEDILEKVHI LREAVTFKKE YLDALPEGVK FYHPLPRHKV
YPTIPNFLDT LPLNGWETQA RNGYWVRIVL LSMFGGALEA PFDTSKKEEK PEEDFIIPAP
ITHGSKGVQK EGKRGIKPIE NGTVIDHIAK GKTPEEIYST IVKIRKILRL YDVDSADGIF
RSSDGNFKGY ISLPDRYLSK REIKKLSAIS PNTTVNIIKN STVVEKYRIK LPPTIYGFEE
LRCKNENCIT NPAHGENASP SFVRDEKGQF ICEYCETPHS FEEIWSI
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