| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1140 |
|---|
| Symbol | |
|---|
| ID | 5169946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1163385 |
|---|
| End bp | 1165436 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640563659 |
|---|
| Product | translation elongation factor G |
|---|
| Protein accession | YP_001244730 |
|---|
| Protein GI | 148270270 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.128625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGAC TTCAGAATGT GCGTTCGGTT GCTTTGATAG GGCACAACGG ATCAGGTAAA
TCGCTTCTTC TCGCACAGCT TCTTTACAGA TCAGGTTTGC TTGACAGGGC AGACACAAAG
TACGTGGATT ACGATCCTGT TGAGGAGGAG AAAGGGGCCA GTTTCTCCTC ACACGTGGCG
TCTCTTGAAT GGAAAGGTAA AAAGTTGTAT TTGATAGATA CCCCTGGATT CTCAGACTTC
ATATCGGAAG TTATAAACGG AATTTTCGTT TCTGAGAACA TCATCTCCGT GGTGAACGCC
GTTGCCGGTG TAGAGATACA GACCGAAAGG ACATGGAACA TAGCAGACGA GATGAAAAAA
CCCATCATGG TTTTCGTCAA CCAGATGGAT AAAGAGAGGG CCAATTTCGA GAATGTGATA
GCCGAACTGA AAGAGAGGTT CTCCAGGAAG ATCGTCCCGG TAGTTGTTCC AATCGGTGCG
GCCGAGAATT TTGAGGGTGT CGTGGATCTT CTGAAGAAAA AGGCCTACAG GTACAATGGA
GATAAAGTTC AGGAAGAGGA CATGCCGGAG AACTTCAACG ATGTGAGATC AGAGATACTC
GAAGATATCG TGGAACAGGA TGAAGAGCTG ATGATGAGAT ACCTCGATGG TGAAGAGATC
GGATACGATG AACTCATGCG GGTACTCAGA GAAGGTTACA AAAAAGGAGA AATCGTGCCT
GTGCTTTCTG GATCCGCGTT GAAAGGAATA GGATTGGATG TTCTCCTTGA TTATCTGGGA
GACATAGGTT CTTCACCCGA GGAAGCACCT TCGTACAAGG CACTCCTGGA AGATGGAACG
GAGATAGAAA TGAAATTCTC CGAAGAAGAG CCGTTCTGCG CTTACATTTT CAAATCCGTG
GTTGACCAGT TTGTTGGAAG GATCACCTTT GCTAAGGTTA TCGCAGGAGT TCTCAGATCT
GGTGACACCA TTGTGAATGT TCAGAAGGAT GTCTCGGAGA AATTAGGGCA CATTTATGTT
CCAATTCTCA AACAGCAGAA GGAAGTTGAA TCCGCTGGTC CCGGTGAGAT CGTCGTTCTT
CTGAAACTCA AGGAAGGTGC CGTTGGAGAA ACACTTGCGC ACAGAGACAG AAGAGTGAGG
GTGGTACCTC CTGCCTTTCC AGAACCCATG TTCTCCAGGT CTGTTCATCC AAAGACGAAG
TCCGATATCG ACAAGATCAG CAATGGACTT TCAAGACTTT CAGATTCCGA CCCAACGTTC
GTGTGGGAGT ACGATCCCGA AACAGGAGAA ACCGTCGTTT CTGGTCTTGG TGCGATGCAC
CTTGATGTCA TGATAGAGAG ATTGAAGAAG ATCTTCGGTG TCGATGTGGA GGTTGGAAAA
CCGAAGATCG CCTACAGAGA GACGATAACA ACAACCGCCG TTGCTGAGCA TAAGCACAAG
AAACAAACGG GTGGACACGG TCAGTACGGT CATGTGAAGA TACAGCTGGA GCCTCTTCCG
AGGGGACAAG GATACGAATT CGTTGACAGG ATAGTTGGAG GAGTGATCCC GAGGAATTTC
ATACCATCCG TTGATAAAGG TATCAGAGAG GCCATGAAGA AAGGAGTTCT GGCAGGATAT
CCTGTAACAG ATGTCAGAGT CATACTCTTT GACGGTTCTT ACCACGAAGT GGATTCCTCG
GACATTTCGT TCCAGATAGC TGCCATTCAG GCCTTCAAAA AAGGAATGGA AGCGGCAAGA
CCCGTCATTC TGGAACCAAT AATGGAGGTT GATGTCTTCG TCCCGGAAGA GAACGCGGGA
GACGTGATGG GAGAAATCTC CAGTAGAAGA GGAAGGCCCC TTGGAATGGA ACCATCTGGA
AAAGGCATGG TGAAGGTGAA AGCAGAGGTT CCACTCGCTG AGATGCTTGA CTTCTCCAGC
AAACTTTCTT CCATCACGAG CGGTCGAGGA TACTTCACGA TGAGGTTCCA GAGGTACGAA
ATAGTGCCTC CAAACATACA AGAGAAGATC ATTGAAGAGA GAAGAAGAGA GATGCAGGAA
CAGGAGAAGT GA
|
|---|
| Protein sequence | MGGLQNVRSV ALIGHNGSGK SLLLAQLLYR SGLLDRADTK YVDYDPVEEE KGASFSSHVA
SLEWKGKKLY LIDTPGFSDF ISEVINGIFV SENIISVVNA VAGVEIQTER TWNIADEMKK
PIMVFVNQMD KERANFENVI AELKERFSRK IVPVVVPIGA AENFEGVVDL LKKKAYRYNG
DKVQEEDMPE NFNDVRSEIL EDIVEQDEEL MMRYLDGEEI GYDELMRVLR EGYKKGEIVP
VLSGSALKGI GLDVLLDYLG DIGSSPEEAP SYKALLEDGT EIEMKFSEEE PFCAYIFKSV
VDQFVGRITF AKVIAGVLRS GDTIVNVQKD VSEKLGHIYV PILKQQKEVE SAGPGEIVVL
LKLKEGAVGE TLAHRDRRVR VVPPAFPEPM FSRSVHPKTK SDIDKISNGL SRLSDSDPTF
VWEYDPETGE TVVSGLGAMH LDVMIERLKK IFGVDVEVGK PKIAYRETIT TTAVAEHKHK
KQTGGHGQYG HVKIQLEPLP RGQGYEFVDR IVGGVIPRNF IPSVDKGIRE AMKKGVLAGY
PVTDVRVILF DGSYHEVDSS DISFQIAAIQ AFKKGMEAAR PVILEPIMEV DVFVPEENAG
DVMGEISSRR GRPLGMEPSG KGMVKVKAEV PLAEMLDFSS KLSSITSGRG YFTMRFQRYE
IVPPNIQEKI IEERRREMQE QEK
|
|---|
| |