Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1047 |
Symbol | |
ID | 5170549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1074091 |
End bp | 1074834 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563564 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_001244640 |
Protein GI | 148270180 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTGA TATTCAAAAG ACCGAAAGCC TTGAGTGATA GAGAATTCAC TTACTGTCCA GGATGCCACC ATGGAATAAT ACACAGGCTG ATAGCAGAAG TGATAGATGA GCTGGGCATT CAGGAAAAAA CCATAATGGT TGCCCCCGTT GGATGCTCTG TTTTCGCTTA CGAATTTTTC GATGTGGATG GGACAGTGGC TCCGCACGGT AGAGCACTCG CAGTAGCAAC CGGTATAAAA AGAGCACTCC CGGACAGGAT AGTCTTCACC TATCAGGGGG ATGGAGATCT CGCGGCCATT GGAATTGCAG AGACAATCCA CGCGGCGAAC CGTGGAGAAA AGTTGACAAC GATATTTGTC AACAACGCGG TGTACGGTAT GACGGGTGGA CAGATGGCAC CCACCACCCT TTTGGGGCAG AAAACCACCA CGACCCCATA TGGCAGAACC GCAGCAAATG ACGGATATCC TCTTCACGTT TCCGAAGCTT TGAGTACTAT CGATGGAGTT GCTTACCTTG AACGTACAAC GGTGAGTACC ACAAAGGATA TTCTGAACAC AAAAAAAGCC ATAAAGAAAG CTTTTCTCGC ACAGATAAAG GGACTGGGAT TCGGAATGGT GGAAGTGCTC AGCACCTGTC CCACAAACTG GGGGATGAGT CCAGTTGAAG CTCAGAACTG GCTTCTGGAG AACATGGTAA AGGAATTTCC ACCGAAAGTT TTTGTTGACA AGGTGGGCGA TTGA
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Protein sequence | MEVIFKRPKA LSDREFTYCP GCHHGIIHRL IAEVIDELGI QEKTIMVAPV GCSVFAYEFF DVDGTVAPHG RALAVATGIK RALPDRIVFT YQGDGDLAAI GIAETIHAAN RGEKLTTIFV NNAVYGMTGG QMAPTTLLGQ KTTTTPYGRT AANDGYPLHV SEALSTIDGV AYLERTTVST TKDILNTKKA IKKAFLAQIK GLGFGMVEVL STCPTNWGMS PVEAQNWLLE NMVKEFPPKV FVDKVGD
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