Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0990 |
Symbol | |
ID | 5171336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1019666 |
End bp | 1020862 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563508 |
Product | thiamine biosynthesis protein ThiI |
Protein accession | YP_001244584 |
Protein GI | 148270124 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0024577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTCTTC TGCTAAAATC TTATCCGGAG GTGAAAGAGT TGAGAGTTTA CATAGTGAGA TATTCCGAGA TAGGTCTCAA AGGAAAGAAC AGAAAAGATT TTGAAGAAGC TCTTAGAAGA AACATCGAGA GAGTAACCGG AATGAAGGTG AAGAGACAGT GGGGAAGATT TCTCATTCCA ATAGATGAAA ACGTAACACT CGATGACAAG CTGAAGAAAA TCTTTGGAAT TCAGAATTTC AGCAAAGGAT TTCTGGTGAG TCACGATTTC GAGGAAGTGA AGAAATATTC ACTGATCGCG GTGAAAGAAA AGCTGGAAAA AGGAAATTAC AGAACTTTCA AGGTGCAGGC CAAAAAGACC TACAAGGAAT ACAAAAAAAG TATATACGAA ATAAACAGTG AGCTCGGTGC CTTGATACTC AAAAACTTCA AGGAACTTTC CGTTGATGTA CACAATCCGG ATTTTGTTCT CGGGGTGGAA GTGAGACCGG AAGGGGTTCT GATTTTCACA GACAGGGTGG AGTGCTACGG TGGACTTCCC GTGGGAACGG GAGGAAAAGC GGTTCTTCTT CTCTCTGGAG GAATAGACAG TCCTGTGGCA GGCTGGTACG CACTGAAAAG AGGAGTTCTC ATAGAGTCCG TCACGTTCGT GTCTCCTCCG TTTACATCGG AGGGGGCCGT GGAAAAAGTG AGAGACATAT TGAGAGTTCT CAGGGAGTTC AGTGGAGGTC ATCCCTTGAG ATTGCACATT GTGAATCTCA CAAAGCTGCA GCTTGAGGTC AAAAAGAACG TACCGGACAA ATACTCGCTG ATCATGTACA GAAGGTCCAT GTTCAGAATA GCGGAAAAAA TAGCAGAGGA AACCGGTGCG GTTGCTTTTT ACACGGGGGA GAACATAGGA CAGGTGGCGA GCCAGACGCT GGAAAACCTC TGGTCTATAG AGAGCGTGAC TACAAGACCC GTGATAAGGC CTCTTTCCGG TTTCGACAAA ACAGAGATCG TCGAAAAGGC GAAAGAGATC GGAACCTACG AGATCTCTAT AAAGCCTTAC CAGGACAGCT GCGTCTTCTT CGCCCCGAAA AATCCTGCAA CGAGATCTCA TCCCTCGATC CTCGAGAAGC TGGAACAGCA GGTTCCAGAT CTTCCCGTTC TCGAAGAAGA AGCGTTCACC TCCAGAAAAG TCGAGGTGAT AGAGTGA
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Protein sequence | MFLLLKSYPE VKELRVYIVR YSEIGLKGKN RKDFEEALRR NIERVTGMKV KRQWGRFLIP IDENVTLDDK LKKIFGIQNF SKGFLVSHDF EEVKKYSLIA VKEKLEKGNY RTFKVQAKKT YKEYKKSIYE INSELGALIL KNFKELSVDV HNPDFVLGVE VRPEGVLIFT DRVECYGGLP VGTGGKAVLL LSGGIDSPVA GWYALKRGVL IESVTFVSPP FTSEGAVEKV RDILRVLREF SGGHPLRLHI VNLTKLQLEV KKNVPDKYSL IMYRRSMFRI AEKIAEETGA VAFYTGENIG QVASQTLENL WSIESVTTRP VIRPLSGFDK TEIVEKAKEI GTYEISIKPY QDSCVFFAPK NPATRSHPSI LEKLEQQVPD LPVLEEEAFT SRKVEVIE
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