| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0957 |
|---|
| Symbol | |
|---|
| ID | 5170584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 985354 |
|---|
| End bp | 986502 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640563475 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001244551 |
|---|
| Protein GI | 148270091 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAACA TGGAAATTTA CTCCCTAAAG CAGGCAAAAA CTATCAACAA ATTGAGAGTT
CTCAACACGA TAAGATTTGA GCCTGGAGTT ACTCGAAACA TGATATCGGA AAAAACCGGG
CTCGATCCCA GCACTGTTAC AAAACTCGTG AACGAGATGA AGAGGAAAAG GATGATCTAC
GAGAAAGGAA TACTCCCATC GAAGTTGGGA AGGCACTCCA AACGACTCTA CGTGAACAGA
GATTTTTCAA AGGCGATAGT GGTCGATCTT GGGGTGACGC ATTCCATCGT TGGGATATCG
TTTTTCGATG GGACAGTTGA AGTGGTCGAT GAATTCGACA CGCCCGACAC ACCTGAGGAG
TGTTTCAGAG TTTTGACGGA AAAGGTTTCC AGGTTCCCCG GTGTTTTTCC ATTGATTGTG
ATAGGGGTTC CAGGATCTGT TGATAAGACT CACAAGAAAT TGGCATTCGC TCCAAATCTC
AACAGATGGA GAGACATAGA TGTGGAGAAG TACTTCAAGG TGTTCGAGGT GTATTTGGAG
AACGACGCGA ACCTTGCGGC CCTCGCGGAA ATGATGAGAA ACAAACATTT CGGTGATAGA
AAGAACATCG TGTACATACT CGTCAGAGAA GGAATAGGTG GAGGCATTAT CATCGAAGGA
AAACTCTACA AGGGTTCTTT CAACGCGGCT GGAGAGATCG GTCACATGAA AATGTACGAC
AGAGGACCGT GTTTTTGTGG AAGGGTCGGA TGCTGGGAGG CCAACACTTC CATCTCCCAC
TGCGTCCGTC AGTATGAAAA GAAAAAACCT CTTCCAGGAA GAACCATGTA CGAAAAGTTC
GAAACGCTCT GCAAAATATA CGAAGAAGAC CCACTGGCTA AAGAGGTACT GGACGAATTC
ACCGGTATCC TCATAGATGG TATTGTGAAT CTTGTGAACA TTCTGAGCCC AGAGATCGTG
ATTGTTGGCG GAGAAGGAGT ATTTCTTCCT GAAGGTGTAT TTGAGGTGAT TGTATCAGAA
ACGAGAAGAC AGGTTCATCC AATGGATAAA GAGGTTTCCG TTGAGAAGGG TAGTCTCTCC
AACAAAGAAG TGGTTTTAGA GGGGACTTCG ATACTTTCTT CCATGATGAT AAGTGAAAGA
CTAGTGTAA
|
|---|
| Protein sequence | MQNMEIYSLK QAKTINKLRV LNTIRFEPGV TRNMISEKTG LDPSTVTKLV NEMKRKRMIY
EKGILPSKLG RHSKRLYVNR DFSKAIVVDL GVTHSIVGIS FFDGTVEVVD EFDTPDTPEE
CFRVLTEKVS RFPGVFPLIV IGVPGSVDKT HKKLAFAPNL NRWRDIDVEK YFKVFEVYLE
NDANLAALAE MMRNKHFGDR KNIVYILVRE GIGGGIIIEG KLYKGSFNAA GEIGHMKMYD
RGPCFCGRVG CWEANTSISH CVRQYEKKKP LPGRTMYEKF ETLCKIYEED PLAKEVLDEF
TGILIDGIVN LVNILSPEIV IVGGEGVFLP EGVFEVIVSE TRRQVHPMDK EVSVEKGSLS
NKEVVLEGTS ILSSMMISER LV
|
|---|
| |