| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0893 |
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| Symbol | |
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| ID | 5171678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 913728 |
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| End bp | 914744 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563411 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244487 |
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| Protein GI | 148270027 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATCGA AATCGATGTT CAAGTATCTT TTGAGACGTT TCATCTTCCT GCTTGTTACC
TACATAGTGG CAACCACTAT TGTGTTTATA CTTCCAAGAG CGATTCCTGG GAATCCTTTA
TCTCAAATCC TTTCCAACCT TTCAAGGGTG GCCCAAGCTA ATCCAGAAGC CATAAGAGCT
GCAGAAAGAA CTTTGATGGA AGAATTTGGT CTCGGGAAAC CCTGGTACGT TCAGTATTTC
GAATTCATCA CCAAGGCACT TCGAGGAGAT CTTGGAACAT CCATTACTTT CTACCCCAGG
AAAGTCATTG ACCTGATCAT TCCAGTCATT CCGTGGACAC TGGCACTCCT TCTTCCAGCG
ACGATAGTCG CCTGGATCTT GGGTAACAGC CTCGGTGCTT TGGCAGCTTA CAAAAGAAAC
ACATGGATTG ACAAGGGAGT TCTTACAACT TCCCTGATAG TTTCTCAGAT TCCATATTAC
TGGCTTGGAA TGATATTCAT CTTCTTTTTT GGAGTTAAAC TCGGCTGGCT TCCTGTTCAG
GGAGCTTATT CTCAGGGGAC GATACCGAAT CTGAGCTGGT CGTTCTTCGT TGATGTTTTG
AAGCACTACA TAATGCCCTT TGCATCCATT GTCGTTTCTG CAATGGGTGG ATGGGCGATA
GGAATGAGGC TCATGGTGAT ATACGAGCTT GGAAGCGATT ATGCGATGTT TTCTGAATAC
CTTGGTATGA AAGACAAGAG AATTTTCAAG TATGTCTTCA GAAACTCCCT CCTCCCACAG
ATTACGGGAC TCGCTTTGAG CTTAGGAGGG GTTTTAGGAG GAGCCCTCAT CACTGAGATC
GTGTTCAATT ACCCTGGAAC GGGATATCTA CTCTTCAGGG CTTTGACTAC ACTCGATTAT
CCATTGATTC AGGGGATCTT TGTGATTCTT ATTGCCTCTA TCTATCTCGC TAACTTCATT
GTGGATTTCC TTTACGCTTT GATAGATCCA AGAATAAGAC TGGGACAGGA GGCATAA
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| Protein sequence | MGSKSMFKYL LRRFIFLLVT YIVATTIVFI LPRAIPGNPL SQILSNLSRV AQANPEAIRA
AERTLMEEFG LGKPWYVQYF EFITKALRGD LGTSITFYPR KVIDLIIPVI PWTLALLLPA
TIVAWILGNS LGALAAYKRN TWIDKGVLTT SLIVSQIPYY WLGMIFIFFF GVKLGWLPVQ
GAYSQGTIPN LSWSFFVDVL KHYIMPFASI VVSAMGGWAI GMRLMVIYEL GSDYAMFSEY
LGMKDKRIFK YVFRNSLLPQ ITGLALSLGG VLGGALITEI VFNYPGTGYL LFRALTTLDY
PLIQGIFVIL IASIYLANFI VDFLYALIDP RIRLGQEA
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