| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0878 |
|---|
| Symbol | |
|---|
| ID | 5170622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 898496 |
|---|
| End bp | 898744 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640563396 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001244472 |
|---|
| Protein GI | 148270012 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000113879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCTT TTTGTTTTGA GGTGATGTGG ATGGACAAGG AAAAATACGT GAAAGGAATA
GAAAAAGCAC TTCAGAAAAT AGCGGTCCGT GAGTTAAAAA TCGTCGATAT CTCCGAAATA
TGGATCGAAA CGGCTCTCCC AAAAGATCTC ATAATCGAAA TACTCAAAGA AGGAAAGCTC
AATATCCCAT CCGGTATCGA GACCATAAAA GACGGGAGGG ATGTCATCTG GAAAAGGTCT
GGTTCCTGA
|
|---|
| Protein sequence | MPPFCFEVMW MDKEKYVKGI EKALQKIAVR ELKIVDISEI WIETALPKDL IIEILKEGKL
NIPSGIETIK DGRDVIWKRS GS
|
|---|
| |