Gene Tpet_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0866 
Symbol 
ID5170525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp885441 
End bp886436 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content44% 
IMG OID640563385 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001244461 
Protein GI148270001 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGG TTCTTGAAAT AAGAGATTTA AGAGTTTATT TCGATCTCAC TGAAGGAACA 
GTAAAAGCGG TTGATGGTGT TTCGTTTGAT ATTCGAAGGG GAGAAATACT GGGTCTTGTC 
GGTGAAAGTG GTTGTGGTAA GAGTGTAACG GCACAGTCTA TCCTGAGAAT TCTTCCAGGA 
AGTGCCCGTA TAGTTAGCGG GGAGATCGTG TTTTACAGGA ACGGAAAGAC TTTGGATCTC 
GCAAAACTCG ATCCCGAAGG TGAAGAAATG AGAGATATAA GAGGGAAGGA TATATCGATG 
ATTTTTCAGG AACCGATGGC CTCTTTTTCT CCTGTGTACA CAGTTGGTGC GCAGATGATA 
GAAGCGATAT TACTTCACGA GAAAGTTTCC AAGGAAGAAG CACGGAAGCG TGTTGTAGAG 
ATGCTCAAAA AGGTGAAGAT TCCGAACGCC GAGAAGGTAG TGGATATGTA TCCTTTTGAA 
CTCTCCGGTG GAATGCTTCA AAGATGTATG ATCGCAATGG CTATGTCTCT GAATCCCACG 
TTGCTTTTAG CGGATGAACC CACGACTGCT CTGGATGTGA CTATACAGGC ACAAATTCTT 
TATCTAATGA AGGAACTTCA AAAGGAGTAC CATTCTTCGA TCCTTCTGAT CACGCACGAT 
ATGGGGGTTG TGGCCCAGAT GGCAGACAGA GTGGCTGTGA TGTACCTCGG AAACATTGTG 
GAGACAGCGG AGGTCTTTGA ACTTTTCAAG AATCCACTCC ATCCTTACAC ACAGGCTTTG 
CTCAGGTCCA TACCGAAGAT TGGAATAAGG AAGACAAGAC TCGATACCAT AAAGGGCATG 
GTTCCAGATC CGTACAATCT TCCAAAGGGT TGCAGGTTCC ACAACAGATG TGAGAAGTTC 
ATGAAAGGAT TGTGTGATGT GAAAGAACCT CCCGAGATTG AGGTAACACC CAGTCACAAA 
GTAAAGTGTT TCCTTTATGG AGGGGAAAAG AAATGA
 
Protein sequence
MEKVLEIRDL RVYFDLTEGT VKAVDGVSFD IRRGEILGLV GESGCGKSVT AQSILRILPG 
SARIVSGEIV FYRNGKTLDL AKLDPEGEEM RDIRGKDISM IFQEPMASFS PVYTVGAQMI 
EAILLHEKVS KEEARKRVVE MLKKVKIPNA EKVVDMYPFE LSGGMLQRCM IAMAMSLNPT 
LLLADEPTTA LDVTIQAQIL YLMKELQKEY HSSILLITHD MGVVAQMADR VAVMYLGNIV 
ETAEVFELFK NPLHPYTQAL LRSIPKIGIR KTRLDTIKGM VPDPYNLPKG CRFHNRCEKF 
MKGLCDVKEP PEIEVTPSHK VKCFLYGGEK K